Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008403.1 Hibiscus syriacus cultivar Beakdansim tig00111172_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60244

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1161--1185
13
1.9
13
100
0
50
24
32
4
40
1.73
11355--11396
2
21.0
2
100
0
84
50
0
0
50
1.00
13050--13145
41
2.3
40
77
7
93
54
1
1
43
1.14
13518--13555
20
1.9
20
100
0
76
31
26
18
23
1.97
17051--17080
15
2.0
15
100
0
60
40
13
6
40
1.71
18241--18341
44
2.3
44
96
0
184
47
11
4
35
1.62
20136--20166
2
15.5
2
93
0
53
51
0
0
48
1.00
24585--24702
18
6.4
18
77
12
98
66
0
32
1
1.02
24583--24688
22
4.8
22
84
13
121
66
0
32
0
0.98
24577--24688
3
36.7
3
74
18
90
67
0
31
0
0.96
24914--24964
21
2.4
22
83
9
70
43
0
1
54
1.11
32069--32101
15
2.1
16
88
5
50
9
24
15
51
1.72
32851--32884
16
2.1
16
94
0
59
32
26
8
32
1.87
35351--35423
24
3.0
24
85
0
101
39
23
9
27
1.85
38550--38591
2
21.0
2
100
0
84
50
0
0
50
1.00
45793--45834
18
2.4
17
88
4
57
80
2
2
14
0.90
47493--47519
4
6.8
4
100
0
54
77
0
0
22
0.76
55832--55895
23
2.8
22
69
9
56
21
17
18
42
1.89
58747--58784
19
2.0
20
94
5
69
36
21
26
15
1.93
58778--58835
23
2.5
23
82
0
71
34
22
25
17
1.96
58927--58965
14
2.7
15
80
8
53
33
25
10
30
1.89

Tables:   1

The End!