Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008406.1 Hibiscus syriacus cultivar Beakdansim tig00111175_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31884

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1573--2239
181
3.7
183
95
2
1195
33
17
14
34
1.90
2113--2150
19
2.1
19
85
14
53
31
15
10
42
1.81
3700--3780
3
27.0
3
75
0
72
23
34
6
35
1.80
3704--3792
12
7.4
12
84
0
88
21
34
7
35
1.82
3704--3795
18
5.1
18
77
0
76
20
34
7
36
1.81
3716--3792
36
2.1
36
90
0
118
20
35
9
35
1.85
3704--3795
6
15.3
6
79
0
67
20
34
7
36
1.81
5253--6380
197
5.9
180
88
9
1295
31
16
15
36
1.90
5379--6381
197
5.1
199
95
1
1801
31
16
15
36
1.90
6490--6536
18
2.6
18
83
10
60
55
10
2
31
1.46
8319--8384
33
2.0
33
90
0
105
22
48
0
28
1.51
8418--8482
21
3.1
21
79
0
76
16
30
13
38
1.88
10708--10750
20
2.3
18
85
14
61
20
16
11
51
1.75
10894--10940
20
2.3
20
89
10
78
17
17
10
55
1.69
10680--11151
181
2.6
181
89
1
687
26
16
14
42
1.86
11218--11702
229
2.1
228
94
1
850
39
7
8
44
1.63
15537--15602
31
2.2
31
91
2
107
25
12
12
50
1.74
17101--17147
21
2.2
21
88
0
76
34
19
21
25
1.96
17743--17790
23
2.2
23
85
7
64
45
4
2
47
1.33
19321--19372
5
10.6
5
91
4
79
55
0
3
40
1.18
21584--21612
14
2.1
14
93
6
51
31
13
34
20
1.92
21791--21823
3
11.0
3
100
0
66
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23042--23087
2
24.5
2
87
12
71
52
0
0
47
1.00
23173--23203
3
10.3
3
92
0
53
61
3
0
35
1.12
23325--23355
16
1.9
16
93
0
53
64
0
6
29
1.18
24742--24792
2
25.5
2
100
0
102
49
0
0
50
1.00
25111--25135
2
12.5
2
100
0
50
52
0
0
48
1.00
26015--26075
32
1.9
32
86
0
86
49
4
6
39
1.50
27407--27438
2
16.0
2
100
0
64
50
0
0
50
1.00
27701--27745
19
2.4
19
96
0
81
46
15
4
33
1.66
29897--30025
68
1.9
69
81
10
158
35
13
8
41
1.76

Tables:   1

The End!