Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008408.1 Hibiscus syriacus cultivar Beakdansim tig00111177_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94065

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1052--1084
13
2.5
13
95
0
57
15
21
48
15
1.81
1087--1141
10
5.6
10
85
10
78
34
29
21
14
1.93
1087--1142
19
2.9
19
87
10
78
33
28
21
16
1.95
8368--8422
10
5.6
10
85
10
78
34
29
21
14
1.93
8368--8423
19
2.9
19
87
10
78
33
28
21
16
1.95
11883--11941
29
2.1
29
81
6
68
37
1
11
49
1.50
23641--23699
29
2.1
29
81
6
68
37
1
11
49
1.50
28391--28449
29
2.1
29
81
6
68
37
1
11
49
1.50
30761--30816
28
2.1
28
80
9
64
35
1
12
50
1.51
31707--31765
29
2.1
29
81
6
68
37
1
11
49
1.50
30478--32375
951
2.0
937
94
2
3320
38
11
12
37
1.79
40694--40749
29
2.0
29
82
6
71
35
1
12
50
1.51
45327--45385
29
2.1
29
81
6
68
37
1
11
49
1.50
47698--47756
29
2.1
29
81
6
68
37
1
11
49
1.50
49973--50031
29
2.1
29
81
6
68
37
1
11
49
1.50
54984--55063
10
8.3
9
78
13
70
16
28
26
28
1.97
54983--55057
29
2.5
30
89
8
118
17
26
26
29
1.97
55059--55097
17
2.3
17
95
0
69
17
43
23
15
1.87
62319--62363
20
2.2
20
88
7
65
24
28
17
28
1.97
62368--62407
19
2.1
19
95
0
71
17
22
32
27
1.96
62406--62447
22
2.0
21
95
4
75
19
47
23
9
1.78
64522--64580
29
2.1
29
81
6
68
37
1
11
49
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66904--66962
29
2.1
29
84
6
77
35
1
11
50
1.49
69280--69338
29
2.1
29
81
6
68
37
1
11
49
1.50
71652--71710
29
2.1
29
84
6
77
35
1
11
50
1.49
72009--72036
5
5.6
5
100
0
56
42
0
21
35
1.53
74041--74099
29
2.1
29
84
6
77
35
1
11
50
1.49
77135--77177
20
2.2
20
95
0
77
20
20
20
37
1.95
77143--77187
20
2.2
20
88
0
63
17
22
22
37
1.94
84232--84263
5
6.8
5
86
13
50
21
56
21
0
1.43
84236--84262
13
2.1
13
100
0
54
22
55
22
0
1.44
88210--88268
29
2.1
29
81
6
68
37
1
11
49
1.50

Tables:   1

The End!