Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008435.1 Hibiscus syriacus cultivar Beakdansim tig00111233_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43738

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11419--11476
16
3.6
16
100
0
116
12
24
51
12
1.72
13520--13556
15
2.4
17
86
13
53
37
0
5
56
1.22
15893--15943
20
2.5
21
73
23
54
25
15
21
37
1.93
16443--16501
2
29.5
2
100
0
118
49
0
0
50
1.00
16617--16719
29
3.6
29
79
6
93
17
25
17
39
1.91
19745--19861
32
3.5
33
81
12
148
11
11
36
41
1.76
20391--20438
18
2.7
18
90
3
71
29
27
8
35
1.86
21439--21473
2
17.5
2
100
0
70
48
0
0
51
1.00
30158--30193
18
2.0
18
89
10
56
50
0
0
50
1.00
31947--32010
3
21.7
3
93
3
112
32
1
0
65
1.02
32011--32044
11
2.9
12
86
8
52
64
0
0
35
0.94
32006--32044
15
2.9
14
85
14
55
61
0
0
38
0.96
32452--32524
16
4.8
16
71
8
62
69
8
21
0
1.14
32454--32491
18
2.1
18
90
9
60
71
7
21
0
1.11

Tables:   1

The End!