Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008444.1 Hibiscus syriacus cultivar Beakdansim tig00111248_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85961

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2622--2656
18
1.9
18
88
0
52
20
8
11
60
1.57
10819--10863
15
2.9
15
83
9
54
68
0
2
28
1.01
17108--17191
25
3.0
29
74
16
86
34
4
7
53
1.49
17826--17857
14
2.3
14
100
0
64
46
12
6
34
1.67
18564--18741
21
8.7
20
71
19
111
21
19
21
37
1.95
18564--18741
42
4.3
42
83
11
242
21
19
21
37
1.95
18627--18680
17
2.9
18
89
10
74
24
18
14
42
1.88
18584--18734
80
1.9
80
95
0
275
20
18
21
39
1.93
21355--21400
24
1.9
24
86
0
65
32
17
39
10
1.84
21360--21415
24
2.3
24
81
0
58
35
16
41
7
1.75
21408--21446
15
2.6
15
91
0
60
43
2
51
2
1.29
24834--24866
17
1.9
17
100
0
66
36
24
0
39
1.56
28476--28508
16
2.1
16
88
11
50
60
6
0
33
1.21
31768--31801
2
17.5
2
93
6
61
52
0
0
47
1.00
44551--44747
97
2.0
97
96
1
360
40
10
15
34
1.81
44948--45008
32
1.9
31
90
3
95
40
14
8
36
1.76
46371--46492
43
2.8
43
78
0
136
32
16
18
31
1.93
48091--48124
15
2.3
15
89
0
50
14
41
26
17
1.88
48572--48619
22
2.2
22
100
0
96
33
8
29
29
1.86
54995--55031
18
2.1
17
90
5
56
8
48
0
43
1.32
57234--57286
16
3.2
16
72
5
52
41
26
1
30
1.66
57604--57816
103
2.1
103
97
0
399
36
23
14
26
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62444--62496
16
3.2
16
72
5
52
41
26
1
30
1.66
62817--62885
23
3.0
23
82
0
84
30
24
23
21
1.99
62908--63113
103
2.0
103
94
0
358
36
23
12
27
1.91
66274--66303
15
2.0
15
100
0
60
53
0
20
26
1.46
67493--67536
23
1.9
23
81
9
54
40
0
11
47
1.39
69826--69873
25
2.0
24
84
8
62
43
16
6
33
1.73
76562--76603
21
2.0
21
95
0
75
26
28
21
23
1.99
76726--76819
33
2.7
35
81
8
129
18
26
29
25
1.98
80077--80118
21
2.0
21
95
0
75
26
28
21
23
1.99
81519--81588
34
2.1
34
100
0
140
44
8
5
41
1.59
84212--84242
11
2.8
11
100
0
62
12
58
19
9
1.62

Tables:   1

The End!