Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000845.1 Hibiscus syriacus cultivar Beakdansim tig00001629_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84562

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14497--14540
21
2.1
21
83
8
54
31
0
4
63
1.14
26965--26995
2
15.5
2
100
0
62
48
0
0
51
1.00
30692--30732
3
13.7
3
100
0
82
65
0
0
34
0.93
30892--31286
136
2.9
137
84
5
521
24
15
26
33
1.95
34827--34890
23
2.8
22
72
13
58
29
25
23
21
1.99
34909--35226
103
3.1
103
95
0
591
37
24
12
25
1.91
40418--40456
17
2.4
17
86
4
62
38
28
7
25
1.83
41048--41072
12
2.1
12
100
0
50
84
0
0
16
0.63
42321--42373
6
8.8
6
89
6
72
64
5
0
30
1.17
50350--50434
30
2.6
32
75
12
84
24
7
9
58
1.54
50448--50510
24
2.6
24
82
0
81
23
14
17
44
1.85
51127--51176
20
2.4
22
73
10
59
36
12
32
20
1.89
61509--61583
21
3.1
24
83
11
75
50
1
5
42
1.33
61509--61579
25
2.7
25
77
18
74
50
1
5
42
1.34
61526--61596
21
3.1
23
80
13
76
50
1
5
42
1.34
61853--61958
39
2.7
39
70
21
96
44
1
16
36
1.59
62335--62409
31
2.5
31
91
2
116
48
12
9
30
1.72
74908--74941
16
2.1
17
88
5
52
64
0
0
35
0.94
78353--78529
46
3.9
45
85
4
203
44
10
20
24
1.82
78353--78469
26
5.0
25
64
23
83
47
11
18
22
1.81
78353--78530
92
1.9
92
84
0
239
44
10
20
24
1.82

Tables:   1

The End!