Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008451.1 Hibiscus syriacus cultivar Beakdansim tig00111258_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76373

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6199--6291
19
4.9
18
85
7
105
15
26
29
29
1.96
6200--6297
29
3.4
28
83
12
128
14
28
28
28
1.95
6200--6297
48
2.1
47
94
5
171
14
28
28
28
1.95
6208--6308
48
2.1
48
85
7
134
14
31
28
24
1.95
6293--6331
17
2.3
17
100
0
78
17
46
23
12
1.83
13660--13732
37
2.0
36
83
2
92
28
21
10
38
1.88
15264--15311
19
2.5
19
93
0
78
33
27
18
20
1.96
17417--17467
23
2.2
23
100
0
102
43
11
0
45
1.40
18718--18777
27
2.2
28
93
3
104
48
11
6
33
1.66
20044--20763
357
2.0
358
96
0
1327
40
8
7
43
1.63
21865--21923
3
19.7
3
87
0
82
0
69
3
27
1.04
24383--24433
14
3.4
15
75
15
52
58
0
9
31
1.30
24381--24445
31
2.3
29
77
15
73
60
0
10
29
1.31
25186--25395
43
4.9
43
80
5
201
34
17
22
25
1.95
25292--25416
44
2.9
44
84
3
130
35
16
21
26
1.95
25474--25518
3
15.0
3
100
0
90
66
0
0
33
0.92
27968--28162
41
4.7
41
84
4
205
34
16
19
29
1.94
27968--28162
82
2.4
82
83
2
230
34
16
19
29
1.94
33317--33664
148
2.3
148
84
3
432
27
12
21
37
1.90
33525--33786
125
2.1
125
86
2
357
28
14
20
36
1.92
33871--33897
14
1.9
14
100
0
54
48
22
0
29
1.51
37853--37915
26
2.5
26
75
14
69
42
1
1
53
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38476--38541
34
1.9
34
93
0
114
46
18
6
28
1.72
39198--39387
76
2.6
74
85
5
244
29
0
12
57
1.40
39979--40022
18
2.4
19
88
3
63
18
6
2
72
1.17
42998--43044
14
3.2
15
82
11
62
19
10
0
70
1.16
42998--43044
5
9.6
5
86
11
53
19
10
0
70
1.16
42998--43044
19
2.4
19
89
3
67
19
10
0
70
1.16
45498--45541
18
2.4
19
88
3
63
20
6
0
72
1.07
45590--45624
8
4.5
8
85
7
54
20
2
0
77
0.90
46293--46347
19
2.8
20
83
8
67
34
20
16
29
1.94
46727--46802
36
2.1
36
97
0
143
19
13
14
52
1.74
46727--46785
18
3.3
18
64
17
50
18
15
11
54
1.71
48208--48266
21
2.8
21
82
5
66
33
25
15
25
1.95
48360--48400
21
2.0
21
90
4
66
36
14
17
31
1.90
49344--49478
53
2.5
53
86
2
173
33
16
10
40
1.82
50133--50189
28
2.0
28
82
0
69
35
19
19
26
1.95
60316--60413
42
2.3
43
77
3
110
27
28
21
22
1.99
66534--66569
19
1.9
18
88
5
54
58
5
22
13
1.56
70303--70357
24
2.2
25
96
3
103
29
29
7
34
1.84
72297--72342
22
2.0
24
87
8
69
69
0
2
28
1.00
72383--72462
39
2.1
39
85
4
108
51
2
11
35
1.51

Tables:   1

The End!