Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008453.1 Hibiscus syriacus cultivar Beakdansim tig00111261_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61766

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13459--13500
18
2.3
18
91
0
66
40
26
4
28
1.76
16328--16389
26
2.4
26
97
0
79
37
38
11
12
1.80
20432--20457
13
2.0
13
100
0
52
38
15
23
23
1.92
30595--30643
20
2.5
20
80
9
57
30
14
4
51
1.61
40240--40301
23
2.7
24
80
7
76
24
27
24
24
2.00
41898--41936
18
2.2
18
90
0
60
46
23
30
0
1.53
44713--44758
3
15.7
3
81
4
58
32
4
2
60
1.28
44852--44925
25
3.0
25
92
2
114
37
18
14
28
1.91
59146--59387
90
2.7
89
87
6
316
26
28
19
25
1.99
59583--59624
3
15.0
3
85
14
63
33
0
0
66
0.92
59584--59622
8
5.1
8
84
12
55
33
0
0
66
0.92
59583--59624
11
3.8
11
87
12
68
33
0
0
66
0.92
59716--59813
25
4.0
25
94
2
164
36
19
15
28
1.92

Tables:   1

The End!