Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008462.1 Hibiscus syriacus cultivar Beakdansim tig00111275_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35585

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10822--10872
20
2.5
20
90
0
75
39
9
19
31
1.84
11423--11461
20
2.0
20
90
10
62
41
0
2
56
1.13
12684--12717
15
2.4
14
95
5
59
41
0
0
58
0.98
22066--22112
24
2.0
24
82
0
58
44
2
0
53
1.12
22189--22244
29
1.9
29
85
0
76
51
12
8
26
1.69
23922--23958
19
1.9
19
94
0
65
32
29
16
21
1.95
24023--24049
12
2.2
12
100
0
54
37
22
22
18
1.95
24076--24212
21
6.6
21
75
12
140
37
24
15
22
1.92
24076--24247
62
2.8
62
87
4
233
34
24
16
24
1.95
24138--24232
41
2.3
41
90
0
154
34
25
15
24
1.95
24056--24247
20
9.4
20
74
12
124
34
24
16
24
1.95
32793--32846
24
2.2
24
93
0
90
20
18
20
40
1.91
35404--35561
20
8.5
20
73
18
135
37
25
15
20
1.92
35499--35581
34
2.4
34
84
11
100
43
22
16
16
1.88

Tables:   1

The End!