Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008468.1 Hibiscus syriacus cultivar Beakdansim tig00111287_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67573

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15055--15125
30
2.4
30
86
11
94
29
7
23
39
1.81
27658--27711
16
3.2
16
78
7
54
51
29
0
18
1.46
33570--33610
22
1.9
21
85
5
55
29
7
7
56
1.54
35374--35413
7
5.9
7
85
5
55
30
27
25
17
1.97
35375--35413
13
2.9
14
84
7
53
30
28
23
17
1.97
35407--35447
17
2.4
17
95
0
73
19
26
39
14
1.90
35441--35530
19
4.7
19
83
8
110
27
28
24
18
1.98
35443--35530
9
9.1
10
72
12
76
28
29
22
19
1.98
42691--42737
7
6.9
7
92
4
69
31
29
23
14
1.95
42733--42770
17
2.2
17
95
0
67
21
26
36
15
1.93
42765--42835
19
3.7
19
90
1
97
25
28
28
18
1.98
42767--42835
9
7.1
10
71
12
63
26
28
26
18
1.98
45097--45250
78
2.0
78
98
0
299
41
16
5
37
1.70
46236--46572
57
6.0
57
87
2
445
32
20
10
35
1.87
46986--47054
20
3.5
20
88
2
95
24
24
13
37
1.91
49959--49988
15
2.1
14
93
6
51
46
6
6
40
1.56
49968--50122
83
1.9
82
91
1
256
34
17
7
40
1.78
53272--53324
26
2.1
25
92
3
88
22
16
24
35
1.95
55876--55960
32
2.7
31
80
3
89
21
25
24
28
1.99
65457--65705
78
3.2
78
85
2
286
30
20
12
36
1.89
66116--66187
20
3.5
20
72
10
72
30
26
13
29
1.94
66119--66227
43
2.6
41
90
7
159
29
27
14
28
1.95

Tables:   1

The End!