Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008469.1 Hibiscus syriacus cultivar Beakdansim tig00111290_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51992

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5304--5470
38
4.5
38
80
6
144
41
2
7
47
1.46
5335--5484
37
4.0
37
82
6
169
42
4
8
46
1.52
5375--5434
17
3.4
17
68
20
50
40
1
5
53
1.33
17480--17539
3
20.0
3
89
6
95
63
0
0
36
0.95
17958--18720
112
6.8
112
92
1
1116
28
18
13
39
1.89
20289--20333
16
2.6
16
82
10
54
53
8
6
31
1.58
20665--20781
7
16.7
7
83
11
134
0
18
0
81
0.70
20665--20795
55
2.4
56
87
10
189
0
17
0
81
0.73
20664--20782
62
2.0
59
91
5
193
0
19
0
80
0.71
27989--28020
15
2.1
15
94
0
55
46
9
18
25
1.79
33432--33491
3
20.0
3
89
6
95
63
0
0
36
0.95
39934--39967
2
16.5
2
93
6
59
50
0
2
47
1.16
44201--44410
65
3.3
62
75
13
185
28
18
22
31
1.97
45084--45113
14
2.1
15
93
6
53
63
26
3
6
1.35
48286--48333
23
2.0
24
96
4
89
37
12
16
33
1.86
50816--50855
21
1.9
21
85
10
55
35
10
2
52
1.48

Tables:   1

The End!