Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008471.1 Hibiscus syriacus cultivar Beakdansim tig00111297_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50258

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4381--4846
229
2.1
221
87
8
654
38
19
13
27
1.90
10643--10785
56
2.5
58
82
2
173
32
11
17
39
1.85
10971--11147
85
2.1
85
81
6
200
29
19
20
30
1.97
15673--15778
41
2.5
41
83
8
126
24
17
25
32
1.97
17606--17649
23
1.9
23
81
9
54
15
4
13
65
1.41
17902--17966
5
12.6
5
76
12
60
16
3
3
76
1.03
17902--17966
21
2.8
22
81
13
69
16
3
3
76
1.03
17932--17967
17
2.2
17
90
5
56
13
2
0
83
0.76
19192--19312
42
2.9
40
80
6
125
25
19
21
33
1.97
21378--21442
5
12.6
5
78
14
62
21
1
4
72
1.11
21378--21442
23
2.9
22
82
13
71
21
1
4
72
1.11
23960--24016
19
2.8
21
76
15
66
77
3
12
7
1.10
28923--28982
5
11.2
5
82
10
66
20
1
3
75
1.04
28923--28982
21
2.8
22
80
16
72
20
1
3
75
1.04
28923--28986
16
3.9
16
76
15
60
20
1
3
75
1.03
32959--32984
13
2.0
13
100
0
52
23
15
46
15
1.83
35124--35546
55
7.7
56
90
3
568
28
22
15
34
1.94
35124--35531
219
1.9
220
87
6
614
27
22
15
34
1.94
35516--36300
54
14.6
54
89
3
1111
23
24
16
34
1.96
38057--38289
124
1.9
125
84
2
317
23
25
18
33
1.96
39580--39619
17
2.4
16
91
8
62
2
20
0
77
0.88
42157--42211
21
2.6
21
91
5
85
14
20
18
47
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47549--47595
24
1.9
25
86
4
69
38
10
21
29
1.87
48236--48283
22
2.2
22
85
7
62
75
0
0
25
0.81
48239--48298
16
3.6
17
82
8
70
71
1
1
25
1.04
49273--49524
29
8.9
29
77
9
252
38
8
0
51
1.38
49491--49593
23
4.1
24
74
16
93
41
7
0
50
1.31
49619--49686
28
2.5
26
77
15
66
52
0
5
41
1.25

Tables:   1

The End!