Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008486.1 Hibiscus syriacus cultivar Beakdansim tig00111327_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56252

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4473--4512
20
1.9
20
85
10
53
32
7
32
27
1.85
13090--13187
36
2.8
36
93
1
162
29
5
33
31
1.79
17242--17266
11
2.3
11
100
0
50
16
8
32
44
1.76
20259--20287
15
2.0
15
93
6
51
0
20
3
75
0.94
20280--20340
27
2.2
29
80
11
74
13
18
9
59
1.61
31482--31531
10
4.6
11
78
11
50
0
8
12
80
0.92
35946--35978
11
3.0
11
90
0
57
51
21
18
9
1.73
43195--43295
33
3.0
33
80
11
82
32
1
33
31
1.69
47001--47026
11
2.4
11
100
0
52
0
15
0
84
0.62
47377--47477
33
3.0
33
80
11
82
32
1
33
31
1.69
49914--49964
19
2.6
20
87
3
68
41
5
17
35
1.74
54086--54136
19
2.6
20
90
3
77
43
5
15
35
1.71

Tables:   1

The End!