Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008487.1 Hibiscus syriacus cultivar Beakdansim tig00111328_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82137

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19604--19640
16
2.3
16
90
0
56
45
5
21
27
1.73
24513--24579
31
2.2
31
97
0
125
22
29
13
34
1.92
26519--26595
30
2.5
30
82
2
100
37
10
23
28
1.88
28528--28558
2
15.5
2
100
0
62
51
0
0
48
1.00
32784--33180
198
2.0
198
98
0
767
39
17
19
23
1.92
44169--44208
3
13.3
3
100
0
80
67
0
0
32
0.91
51059--51122
31
2.0
32
84
3
85
37
21
17
23
1.94
59560--59591
2
16.0
2
100
0
64
50
0
0
50
1.00
62929--63068
51
2.7
53
93
3
230
31
10
20
38
1.85
63219--63269
25
2.0
25
85
7
68
39
13
11
35
1.82
73212--73377
79
2.1
79
97
0
314
39
31
6
22
1.80

Tables:   1

The End!