Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000850.1 Hibiscus syriacus cultivar Beakdansim tig00001639_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46817

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4372--4412
20
2.0
21
86
9
59
41
7
14
36
1.74
6871--6910
21
1.9
21
100
0
80
30
10
12
47
1.74
7021--7085
32
2.0
32
90
0
103
33
6
16
43
1.73
10808--10863
25
2.2
26
84
12
73
75
1
3
19
1.05
10905--10966
18
3.4
18
93
2
97
72
0
6
20
1.06
11666--11693
12
2.3
12
100
0
56
53
14
0
32
1.41
11592--11748
85
1.9
84
85
4
217
54
12
1
30
1.49
13486--13528
11
3.9
11
82
8
52
72
9
4
13
1.26
19134--19180
19
2.5
19
82
3
60
70
2
6
21
1.20
19675--19711
20
1.9
19
89
10
58
45
10
24
18
1.81
19859--19931
36
2.0
36
84
10
96
49
4
1
45
1.29
20313--20502
85
2.2
88
85
6
255
55
10
2
31
1.45
21903--21939
16
2.4
16
90
4
58
54
10
0
35
1.36
23605--23646
22
2.0
21
86
13
59
28
0
7
64
1.20
24632--24664
14
2.4
14
100
0
66
54
0
33
12
1.37
34369--34730
133
2.7
132
78
5
334
31
19
16
32
1.94
34351--34921
132
4.3
132
73
6
372
31
18
17
32
1.94
34350--34917
265
2.1
264
80
5
612
31
18
17
32
1.94
36213--36316
9
10.9
9
69
17
52
8
11
0
78
1.00
36213--36316
19
5.4
19
71
21
67
8
11
0
78
1.00
39447--39486
2
21.0
2
90
10
66
47
0
0
52
1.00
46721--46777
20
2.8
20
87
12
80
26
21
21
31
1.98

Tables:   1

The End!