Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008505.1 Hibiscus syriacus cultivar Beakdansim tig00111357_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57617

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2909--2956
25
1.9
25
83
8
62
4
18
14
62
1.47
3474--3518
3
14.7
3
90
4
72
64
2
0
33
1.06
3469--3518
25
2.0
26
96
0
77
62
2
0
36
1.07
8847--8879
13
2.5
13
95
0
57
63
0
3
33
1.10
12223--12260
2
19.0
2
100
0
76
50
0
0
50
1.00
21191--21250
31
1.9
31
86
0
84
41
15
26
16
1.88
21362--21403
22
1.9
22
90
0
66
21
9
23
45
1.81
34786--35019
41
5.7
41
94
1
378
21
21
26
31
1.98
35099--35134
6
6.5
6
90
9
51
30
52
16
0
1.44
35880--35947
19
3.4
19
67
15
55
30
19
22
27
1.97
35885--35977
42
2.2
42
88
0
141
32
22
20
24
1.98
35913--35977
21
3.1
20
68
16
51
30
27
20
21
1.98
36676--36724
25
2.0
25
84
11
66
55
0
4
40
1.19
40477--40514
17
2.2
17
90
0
58
26
10
0
63
1.27
45455--45483
3
9.7
3
100
0
58
65
0
0
34
0.93

Tables:   1

The End!