Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008538.1 Hibiscus syriacus cultivar Beakdansim tig00111425_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61064

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--133
17
3.3
15
75
20
50
40
0
0
60
0.97
1226--1291
2
33.5
2
85
14
93
45
1
1
51
1.19
1406--1459
2
29.5
2
80
17
64
46
0
0
53
1.00
1402--1469
12
5.6
12
74
22
54
42
1
0
55
1.08
1405--1459
21
2.7
21
83
5
69
45
0
0
54
0.99
12958--13613
105
6.4
105
92
3
1034
35
24
17
22
1.95
14113--14151
13
3.1
13
88
3
62
43
0
2
53
1.14
14110--14165
21
2.5
22
78
16
62
41
0
3
55
1.17
15348--15390
17
2.4
18
85
14
54
27
6
4
60
1.43
15449--15512
2
31.5
2
85
14
87
45
3
1
50
1.27
19209--19267
29
2.1
28
87
3
82
33
8
30
27
1.86
23255--23343
32
2.8
32
79
6
101
42
6
4
46
1.50
32906--32936
2
15.5
2
93
0
53
48
3
0
48
1.17
58217--58259
22
2.0
21
90
4
68
20
18
25
34
1.96
58337--58696
174
2.0
174
90
4
562
46
8
3
41
1.50
58829--58857
15
1.9
15
100
0
58
17
6
27
48
1.72

Tables:   1

The End!