Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008542.1 Hibiscus syriacus cultivar Beakdansim tig00111431_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35884

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5219--5324
43
2.5
43
84
1
124
29
13
18
38
1.89
5243--5333
43
2.1
43
89
0
137
26
8
20
43
1.81
14640--14673
18
1.9
17
88
5
50
52
11
8
26
1.67
15172--15196
12
2.1
12
100
0
50
24
0
0
76
0.80
19648--19683
16
2.2
17
90
5
56
41
2
2
52
1.30
23962--24186
64
3.5
64
89
4
310
27
16
23
32
1.95
29068--29111
20
2.1
22
87
8
65
75
2
0
22
0.92
29064--29113
19
2.6
19
75
12
57
70
2
0
28
0.99
29907--29958
24
2.2
24
93
3
88
30
25
25
19
1.98
29907--29964
24
2.5
24
88
2
73
32
22
24
20
1.98
29960--30018
23
2.6
23
83
0
73
37
25
13
23
1.92

Tables:   1

The End!