Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008544.1 Hibiscus syriacus cultivar Beakdansim tig00111433_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84437

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1499--1583
39
2.2
38
80
14
93
22
17
23
36
1.95
1455--1641
59
3.1
59
72
14
177
21
18
20
39
1.93
1444--1591
20
7.5
20
71
15
80
23
17
20
37
1.94
1515--1591
39
2.0
39
87
10
113
22
18
22
37
1.94
1527--1603
20
3.9
20
80
11
88
19
15
24
40
1.90
1601--1639
20
2.0
20
89
0
60
23
20
15
41
1.90
1444--1663
118
1.9
118
83
3
291
22
17
22
37
1.94
2480--3191
356
2.0
357
98
0
1365
40
12
16
31
1.85
15641--15673
15
2.2
15
94
0
57
51
30
3
15
1.58
18160--18197
7
5.7
7
90
3
53
2
39
0
57
1.12
19312--19359
23
2.1
23
84
7
62
12
27
27
33
1.92
19319--19391
24
3.1
24
70
16
71
20
24
23
31
1.98
19927--19961
11
3.2
11
91
0
52
40
17
17
25
1.90
20423--20472
19
2.7
18
87
6
73
50
2
16
32
1.56
20423--20487
19
3.5
18
83
6
58
46
4
18
30
1.69
20509--20568
13
4.7
13
79
4
68
51
0
25
23
1.48
20593--20675
39
2.1
39
93
0
139
24
6
19
50
1.69
22879--22953
25
3.0
25
92
0
123
22
22
21
33
1.97
27372--27421
21
2.3
23
74
19
54
42
4
0
54
1.19
28466--28512
3
15.3
3
78
12
51
36
0
2
61
1.08
39775--39868
48
1.9
49
84
2
127
46
14
23
14
1.82
40655--41383
105
6.9
105
95
0
1323
33
25
18
22
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41451--41492
20
2.1
20
86
0
57
23
19
19
38
1.93
41715--41764
21
2.3
23
74
19
54
42
4
0
54
1.19
42917--42983
18
3.8
18
76
2
64
23
7
0
68
1.15
44750--44790
18
2.3
18
87
4
57
70
0
4
24
1.06
50017--50069
7
7.6
7
84
0
70
64
0
1
33
1.05
50017--50069
14
3.8
14
92
0
88
64
0
1
33
1.05
53591--53748
63
2.5
64
83
5
178
34
21
17
26
1.95
54391--54474
23
3.7
23
86
0
123
17
25
27
29
1.98
61335--61393
23
2.6
23
88
0
91
18
27
27
27
1.98
61336--61403
23
3.0
23
86
0
73
20
25
25
29
1.99
62937--63018
35
2.3
35
97
0
155
25
28
21
24
1.99
62991--63152
63
2.6
63
81
6
186
23
24
21
30
1.99
64494--64534
18
2.3
18
91
0
64
34
14
0
51
1.43
67247--67346
44
2.3
44
84
3
130
23
21
22
34
1.97
77591--77659
5
13.8
5
95
0
93
4
40
36
18
1.71
77657--77705
6
8.2
6
95
0
80
4
16
48
30
1.64
83551--83610
5
12.0
5
94
0
66
6
40
36
16
1.75
83612--83666
6
9.2
6
95
0
101
1
16
49
32
1.56
83915--83969
22
2.5
22
75
0
56
29
9
23
38
1.85

Tables:   1

The End!