Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008553.1 Hibiscus syriacus cultivar Beakdansim tig00111448_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57067

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28618--28647
3
10.0
3
100
0
60
66
0
0
33
0.92
31306--31364
31
1.9
31
100
0
118
35
25
10
28
1.89
31314--31519
85
2.4
86
91
4
337
31
23
11
33
1.91
31780--31823
21
2.1
21
100
0
88
22
18
29
29
1.97
32637--32668
3
10.7
3
93
0
55
31
0
3
65
1.08
34117--34142
2
13.0
2
100
0
52
0
0
50
50
1.00
40024--40105
2
43.5
2
76
11
66
56
2
1
40
1.20
40041--40078
11
3.5
11
85
10
51
68
2
0
28
1.03
40024--40149
59
2.0
61
83
11
159
57
1
4
35
1.29
41089--41136
22
2.1
23
88
11
73
56
0
0
43
0.99
41369--41943
211
2.8
211
93
4
981
22
18
24
33
1.97
41471--41943
105
4.5
105
98
0
910
22
18
25
33
1.96
52155--52194
19
2.1
19
86
9
55
75
2
5
17
1.10
53471--53516
17
2.7
17
80
16
51
73
6
0
19
1.04
53754--53830
2
40.5
2
75
10
63
55
2
1
40
1.22

Tables:   1

The End!