Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008556.1 Hibiscus syriacus cultivar Beakdansim tig00111461_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73429

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2783--2819
14
2.7
14
91
4
58
24
43
0
32
1.55
3222--3277
11
5.0
12
73
20
50
76
7
14
1
1.07
5565--5602
14
2.5
15
87
8
51
68
2
10
18
1.30
9128--9190
12
5.5
12
81
7
69
0
7
9
82
0.84
9940--10041
50
2.2
47
81
15
115
50
14
1
33
1.55
22269--22317
22
2.3
21
79
10
55
59
18
14
8
1.59
25072--25126
23
2.3
25
81
6
69
60
14
18
7
1.57
27869--27923
23
2.3
25
81
6
69
60
14
18
7
1.57
40104--40198
13
7.7
13
67
11
56
32
1
37
28
1.64
40057--40205
35
4.2
36
88
3
203
31
2
36
29
1.72
44193--44243
11
4.8
10
77
18
50
3
11
1
82
0.89
44195--44243
18
2.6
18
81
12
55
4
10
2
83
0.85
44426--44477
26
2.0
26
82
17
63
57
0
19
23
1.40
44630--44748
35
3.4
35
83
2
148
31
4
35
28
1.76
47869--47898
13
2.4
13
94
5
53
43
0
30
26
1.55
52104--52145
20
2.2
19
86
4
57
33
9
7
50
1.62
57256--57289
14
2.4
14
90
9
52
79
2
17
0
0.86
66649--66688
17
2.4
17
86
0
53
32
15
12
40
1.84
66695--66753
17
3.5
17
68
13
50
28
15
8
47
1.74

Tables:   1

The End!