Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000856.1 Hibiscus syriacus cultivar Beakdansim tig00001659_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63307

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15191--16253
559
1.9
561
90
1
1706
40
14
10
34
1.80
16598--16691
29
3.2
29
89
0
143
39
15
17
27
1.90
20009--20073
29
2.2
29
91
0
103
38
15
18
27
1.91
21127--21191
17
3.8
17
81
6
69
38
7
13
40
1.74
25729--25778
23
2.2
23
96
0
91
14
30
12
44
1.81
39005--39165
60
2.7
59
79
9
191
39
6
25
29
1.80
39001--39187
60
3.1
59
76
9
184
37
5
26
29
1.80
40849--40893
21
2.1
21
87
0
63
31
28
24
15
1.96
42585--42651
22
3.0
22
95
2
116
19
26
28
25
1.99
45161--45199
19
2.1
19
100
0
78
25
15
10
48
1.76
47574--47635
27
2.3
27
97
0
115
20
17
25
35
1.95
50752--50806
24
2.3
24
84
6
67
32
1
1
63
1.15
50765--50818
24
2.2
25
77
9
58
31
1
3
62
1.23
52886--52943
25
2.4
25
77
11
59
63
0
0
36
0.94
52874--52959
35
2.5
35
98
1
165
61
0
0
38
0.96

Tables:   1

The End!