Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008564.1 Hibiscus syriacus cultivar Beakdansim tig00111474_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58701

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6037--6095
21
3.0
20
71
21
52
30
1
1
66
1.12
11338--11384
16
2.9
16
75
12
51
72
0
23
4
1.02
15810--15889
22
3.6
22
86
0
106
33
15
12
38
1.84
16526--17314
76
10.4
76
95
0
1393
24
19
21
35
1.96
17444--17494
3
16.7
3
84
11
68
37
0
0
62
0.95
17460--17504
22
2.0
22
82
0
54
44
0
0
55
0.99
34612--34660
23
2.1
23
85
7
64
57
14
2
26
1.48
39910--39972
19
3.3
19
79
0
63
22
14
14
49
1.79
42358--42402
2
23.0
2
95
4
83
51
0
0
48
1.00
47291--47369
29
2.9
26
67
17
61
48
2
3
45
1.34
47341--47382
19
2.0
20
86
13
59
45
2
4
47
1.36
48415--48453
8
4.8
8
82
17
53
38
0
0
61
0.96
50136--50254
18
6.7
18
76
11
111
42
11
13
32
1.81
50146--50233
35
2.5
35
90
1
133
43
14
11
30
1.81
50136--50257
53
2.3
52
80
5
129
41
12
13
32
1.81
51618--51642
9
2.8
9
100
0
50
44
12
12
32
1.78
56763--56799
19
1.9
19
88
0
56
27
16
35
21
1.94
56808--56881
20
3.7
20
96
3
132
28
20
25
25
1.99
57739--57764
11
2.4
11
100
0
52
38
0
0
61
0.96

Tables:   1

The End!