Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008571.1 Hibiscus syriacus cultivar Beakdansim tig00111497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60014

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4066--4124
29
2.0
29
100
0
118
23
13
13
49
1.78
7526--7573
21
2.3
20
80
16
53
27
0
16
56
1.41
15319--15364
23
2.0
23
83
8
58
26
15
17
41
1.88
16243--16286
23
1.9
23
90
0
70
40
4
9
45
1.56
16715--16755
21
1.9
22
85
5
57
51
12
0
36
1.40
23077--23133
30
1.9
30
85
0
78
47
12
7
33
1.68
34320--34346
6
4.5
6
100
0
54
81
0
0
18
0.69
37177--37215
19
2.0
19
85
5
51
46
0
0
53
1.00
38591--38652
25
2.5
25
100
0
124
46
3
6
43
1.45
42451--42519
23
3.0
23
82
0
93
31
26
24
17
1.97
42872--42909
2
19.0
2
100
0
76
50
0
0
50
1.00
45707--45761
16
3.5
16
73
11
60
61
7
0
30
1.23
46182--46248
31
2.2
31
84
7
84
52
8
7
31
1.61
58039--58078
21
1.9
21
94
0
71
47
12
5
35
1.63

Tables:   1

The End!