Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000086.1 Hibiscus syriacus cultivar Beakdansim tig00000157_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60985

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3536--3564
6
5.0
6
95
4
51
17
13
0
68
1.20
5537--5578
14
2.9
14
85
7
57
54
0
33
11
1.37
15922--15970
22
2.2
22
82
7
55
34
2
4
59
1.28
15935--15995
26
2.2
28
88
5
90
34
0
1
63
1.04
16804--16833
13
2.3
13
94
0
51
33
10
3
53
1.51
47023--47161
61
2.2
64
84
5
176
30
17
25
25
1.97
49264--49470
87
2.4
87
80
4
204
33
23
14
28
1.94
50131--50255
41
3.0
41
95
0
223
43
12
9
34
1.76
51532--51566
12
3.0
12
95
4
63
68
0
0
31
0.90
52890--52923
5
6.4
5
96
3
50
73
0
0
26
0.83
53587--53655
31
2.2
32
86
2
95
39
5
27
27
1.79
59647--59703
2
29.5
2
92
7
100
49
0
0
50
1.00

Tables:   1

The End!