Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000860.1 Hibiscus syriacus cultivar Beakdansim tig00001666_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43652

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
715--762
19
2.5
19
96
0
87
27
20
27
25
1.99
859--904
19
2.4
19
100
0
92
19
17
32
30
1.95
7202--7233
14
2.3
14
100
0
64
25
46
28
0
1.53
8279--8465
36
5.2
36
87
1
259
32
24
24
18
1.97
8279--8465
71
2.6
72
87
1
268
32
24
24
18
1.97
21338--21410
30
2.4
30
90
0
110
32
24
17
24
1.97
21397--21520
63
2.0
62
88
4
187
32
20
19
27
1.97
21396--21523
31
4.1
31
80
9
152
33
21
18
26
1.96
22899--22943
21
2.1
21
87
0
63
15
24
28
31
1.96
27093--27155
23
2.7
23
92
0
99
22
17
20
39
1.92
29233--29297
30
2.2
30
86
5
87
38
18
26
16
1.92
30360--30426
34
2.0
34
85
5
91
43
11
10
34
1.76
34958--34995
3
12.7
3
100
0
76
34
0
0
65
0.93
35780--35822
21
2.0
21
95
0
77
18
2
30
48
1.60
38171--38229
24
2.5
24
97
0
109
28
15
16
38
1.89
38450--38515
30
2.2
30
86
0
87
12
30
22
34
1.91

Tables:   1

The End!