Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008601.1 Hibiscus syriacus cultivar Beakdansim tig00111554_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61091

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8500--8535
2
18.0
2
100
0
72
50
0
0
50
1.00
12086--12257
37
4.7
36
68
13
109
31
16
12
39
1.85
12086--12346
72
3.6
72
87
4
355
32
15
11
40
1.83
12382--12439
26
2.2
26
96
0
107
41
6
32
18
1.78
12405--12827
39
10.9
39
89
1
589
40
11
26
21
1.87
12405--13052
117
5.7
117
84
5
795
41
11
25
22
1.87
12794--12854
26
2.3
26
85
0
86
44
8
26
21
1.80
12688--12969
142
2.0
143
91
0
458
41
11
24
22
1.87
12830--12894
20
3.3
20
64
12
53
43
9
26
21
1.82
12821--13052
39
5.9
39
87
0
302
41
11
23
23
1.86
12640--13010
181
2.0
182
89
1
575
42
11
23
22
1.86
13244--13279
3
12.0
3
87
0
54
36
0
2
61
1.11
14948--14985
20
1.9
20
100
0
76
42
5
5
47
1.48
15015--15067
28
1.9
27
85
11
72
41
9
1
47
1.47
21414--21444
2
15.5
2
100
0
62
51
0
48
0
1.00
23290--23314
10
2.5
10
100
0
50
24
20
20
36
1.95
27310--27658
136
2.6
136
90
1
524
24
22
18
34
1.96
28630--28686
1
57.0
1
76
0
51
1
10
0
87
0.61
28623--28686
22
2.9
23
80
19
82
3
12
0
84
0.74
28630--28689
14
4.6
13
82
14
79
1
11
0
86
0.64
28630--28689
24
2.5
23
89
7
93
1
11
0
86
0.64
56782--56856
37
2.0
38
89
5
118
45
8
5
41
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60466--60519
5
10.8
5
97
0
99
42
0
16
40
1.48

Tables:   1

The End!