Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000862.1 Hibiscus syriacus cultivar Beakdansim tig00001668_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55389

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1420--1446
13
2.1
13
100
0
54
48
22
0
29
1.51
8264--8300
15
2.5
15
95
0
65
8
70
16
5
1.30
9995--10030
14
2.6
14
100
0
72
16
30
19
33
1.94
13867--13944
31
2.5
30
82
12
95
26
10
11
51
1.70
23607--23637
3
10.3
3
92
0
53
32
3
0
64
1.09
31279--31330
21
2.5
21
84
9
63
42
0
0
57
0.98
34678--34841
80
2.0
80
100
0
328
30
14
13
42
1.83
38841--38903
30
2.1
30
90
0
99
22
9
26
41
1.84
39114--39183
33
2.1
33
100
0
140
2
35
10
51
1.50
39119--39175
19
3.3
19
64
31
54
1
38
8
50
1.44
51245--51320
36
2.1
36
85
7
100
47
1
3
47
1.29

Tables:   1

The End!