Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01008622.1 Hibiscus syriacus cultivar Beakdansim tig00111585_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 124094
ACGTcount: A:0.32, C:0.21, G:0.18, T:0.29
Found at i:12 original size:7 final size:7
Alignment explanation
Indices: 1--11485 Score: 13227
Period size: 7 Copynumber: 1700.4 Consensus size: 7
1 CCCTAAA
1 CCCTAAA
8 CCCTAAA
1 CCCTAAA
15 CCCT-AA
1 CCCTAAA
21 CCCTAAA
1 CCCTAAA
28 CCCTAAA
1 CCCTAAA
35 CCCTAAA
1 CCCTAAA
42 -CCTAAA
1 CCCTAAA
48 CCCTAAA
1 CCCTAAA
55 -CCTAAAAAA
1 CCCT---AAA
64 CCCTAAA
1 CCCTAAA
71 CCCTAAA
1 CCCTAAA
78 CCCTAAA
1 CCCTAAA
85 CCCTAAA
1 CCCTAAA
92 CCCTAAA
1 CCCTAAA
99 CCCT-AA
1 CCCTAAA
105 CCCT-AA
1 CCCTAAA
111 CCCTAAA
1 CCCTAAA
118 CCCTAAA
1 CCCTAAA
125 CCCT-AA
1 CCCTAAA
131 CCCTAAA
1 CCCTAAA
138 CCCTAAA
1 CCCTAAA
145 CCCT-AA
1 CCCTAAA
151 CCCTAAA
1 CCCTAAA
158 CCCCCCT-AA
1 ---CCCTAAA
167 -CCTAAA
1 CCCTAAA
173 CCCTAAA
1 CCCTAAA
180 CCCTAAA
1 CCCTAAA
187 -CCT-AA
1 CCCTAAA
192 CCCTAAA
1 CCCTAAA
199 -CCTAAA
1 CCCTAAA
205 CCCTAAA
1 CCCTAAA
212 CCCTAAA
1 CCCTAAA
219 CCCTAAA
1 CCCTAAA
226 -CCTAAA
1 CCCTAAA
232 CCCTAAA
1 CCCTAAA
239 CCCTAAA
1 CCCTAAA
246 CCCTAAA
1 CCCTAAA
253 CCCTAAA
1 CCCTAAA
260 CCCTAAA
1 CCCTAAA
267 CCCTAAA
1 CCCTAAA
274 CCCTAAA
1 CCCTAAA
281 CCCTAAA
1 CCCTAAA
288 CCCTAAA
1 CCCTAAA
295 CCCT-AA
1 CCCTAAA
*
301 CCCGAAA
1 CCCTAAA
308 CCCTAAA
1 CCCTAAA
315 CCCTAAA
1 CCCTAAA
*
322 CCCGAAA
1 CCCTAAA
329 CCCTAAA
1 CCCTAAA
336 CCCTAAA
1 CCCTAAA
343 CCCTAAA
1 CCCTAAA
350 CCCTAAA
1 CCCTAAA
357 CCCTAAA
1 CCCTAAA
*
364 CCCTACA
1 CCCTAAA
371 CCCTGAAA
1 CCCT-AAA
379 CCCTAAA
1 CCCTAAA
386 CCCTAAA
1 CCCTAAA
393 CCCTAAA
1 CCCTAAA
400 CCCTAAA
1 CCCTAAA
*
407 CCCGAAA
1 CCCTAAA
414 CCCTAAA
1 CCCTAAA
421 CCCTAAA
1 CCCTAAA
428 CCCT-AA
1 CCCTAAA
434 CCCT-AA
1 CCCTAAA
440 CCCTAAA
1 CCCTAAA
447 CCCTAAA
1 CCCTAAA
454 CCCTAAA
1 CCCTAAA
461 CCCTAAA
1 CCCTAAA
468 CCCTAAA
1 CCCTAAA
*
475 CCCCGAAA
1 -CCCTAAA
483 -CCTAAA
1 CCCTAAA
489 CCCTAAA
1 CCCTAAA
496 CCCTAAA
1 CCCTAAA
503 CCCTAAA
1 CCCTAAA
510 CCC--AA
1 CCCTAAA
515 -CCTAAA
1 CCCTAAA
521 CCCTAAA
1 CCCTAAA
528 CCCT-AA
1 CCCTAAA
534 -CCTAAA
1 CCCTAAA
540 CCCT-AA
1 CCCTAAA
546 CCCTAAA
1 CCCTAAA
553 CCCTAAA
1 CCCTAAA
560 CCCTAAA
1 CCCTAAA
567 CCCTAAA
1 CCCTAAA
*
574 -CC-GAA
1 CCCTAAA
579 CCCT-AA
1 CCCTAAA
585 CCCTAAA
1 CCCTAAA
592 CCCTAAA
1 CCCTAAA
599 CCCTAAA
1 CCCTAAA
606 CCCTAAA
1 CCCTAAA
*
613 CCCCAAA
1 CCCTAAA
620 -CCTAAA
1 CCCTAAA
626 CCCTAAA
1 CCCTAAA
633 CCCTAAA
1 CCCTAAA
640 CCCTAAA
1 CCCTAAA
*
647 CCCGAAA
1 CCCTAAA
654 CCCT-AA
1 CCCTAAA
660 CCCT-AA
1 CCCTAAA
666 CCCTAAA
1 CCCTAAA
673 -CC--AA
1 CCCTAAA
677 CCCTAAA
1 CCCTAAA
684 CCCTAAA
1 CCCTAAA
691 CCCT-AA
1 CCCTAAA
697 -CCTAAA
1 CCCTAAA
703 -CCTAAA
1 CCCTAAA
709 CCCTAAA
1 CCCTAAA
716 CCCTAAAA
1 CCCT-AAA
724 CCCTAAA
1 CCCTAAA
731 CCCTAAA
1 CCCTAAA
738 CCCTAAA
1 CCCTAAA
745 CCCTAAA
1 CCCTAAA
752 -CCTAAA
1 CCCTAAA
758 CCCCTAAA
1 -CCCTAAA
766 CCCT-AA
1 CCCTAAA
772 -CCTAAA
1 CCCTAAA
778 CCCTAAAAAA
1 CCCT---AAA
788 CCCTAAA
1 CCCTAAA
795 CCCTAAA
1 CCCTAAA
802 CCCTAAA
1 CCCTAAA
809 CCCT-AA
1 CCCTAAA
815 CCCTAAA
1 CCCTAAA
822 CCCTAAA
1 CCCTAAA
829 CCCTAAA
1 CCCTAAA
836 CCCTAAA
1 CCCTAAA
843 CCCTAAA
1 CCCTAAA
850 CCCT-AA
1 CCCTAAA
856 CCCTAAAA
1 CCCT-AAA
864 CCCTAAA
1 CCCTAAA
871 -CCTAAA
1 CCCTAAA
877 CCCTAAA
1 CCCTAAA
884 -CCTAAA
1 CCCTAAA
890 CCCCCTAAA
1 --CCCTAAA
899 CCCTAAA
1 CCCTAAA
906 CCCTAAA
1 CCCTAAA
913 CCCTAAA
1 CCCTAAA
920 CCCTAAA
1 CCCTAAA
927 CCCTAAA
1 CCCTAAA
934 CCCTAAA
1 CCCTAAA
941 CCCTAAA
1 CCCTAAA
948 CCCTAAA
1 CCCTAAA
955 CCCT-AA
1 CCCTAAA
961 CCCTAAA
1 CCCTAAA
968 CCCT-AA
1 CCCTAAA
974 -CCTAAA
1 CCCTAAA
980 CCCTAAA
1 CCCTAAA
987 CCCTAAA
1 CCCTAAA
994 CCCTAAA
1 CCCTAAA
1001 CCCTAAA
1 CCCTAAA
1008 CCCTAAA
1 CCCTAAA
1015 CCCTAAA
1 CCCTAAA
1022 CCCTAAA
1 CCCTAAA
1029 CCCTAAA
1 CCCTAAA
1036 -CCTAAA
1 CCCTAAA
1042 CCCTAAA
1 CCCTAAA
1049 CCCT-AA
1 CCCTAAA
1055 CCCT-AA
1 CCCTAAA
1061 CCCTAAA
1 CCCTAAA
1068 CCCTAAA
1 CCCTAAA
*
1075 CCCGAAA
1 CCCTAAA
1082 --CTAAA
1 CCCTAAA
1087 -CCTAAA
1 CCCTAAA
1093 CCCTAAA
1 CCCTAAA
1100 CCCT-AA
1 CCCTAAA
1106 CCC--AA
1 CCCTAAA
1111 CCCTAAA
1 CCCTAAA
1118 -CCT-AA
1 CCCTAAA
1123 CCCTAAA
1 CCCTAAA
1130 CCCTAAA
1 CCCTAAA
1137 CCCTAAA
1 CCCTAAA
1144 CCCTAAA
1 CCCTAAA
1151 CCCTAAA
1 CCCTAAA
1158 CCCTAAA
1 CCCTAAA
1165 CCCTAAA
1 CCCTAAA
1172 CCCTAAA
1 CCCTAAA
1179 CCCTAAA
1 CCCTAAA
1186 CCCTAAA
1 CCCTAAA
1193 CCCTAAA
1 CCCTAAA
1200 CCCT-AA
1 CCCTAAA
1206 CCCTAAA
1 CCCTAAA
1213 CCCT--A
1 CCCTAAA
1218 CCCTAAA
1 CCCTAAA
1225 CCCTAAA
1 CCCTAAA
1232 CCCTAAA
1 CCCTAAA
1239 -CCTAAA
1 CCCTAAA
1245 CCCTAAA
1 CCCTAAA
1252 CCCTAAA
1 CCCTAAA
1259 CCCTAAA
1 CCCTAAA
1266 CCCTAAA
1 CCCTAAA
1273 CCCTAAA
1 CCCTAAA
1280 CCCT-AA
1 CCCTAAA
1286 CCCTAAA
1 CCCTAAA
1293 CCCTAAA
1 CCCTAAA
1300 CCCTAAA
1 CCCTAAA
1307 CCCT-AA
1 CCCTAAA
1313 CCCT-AA
1 CCCTAAA
*
1319 CCCGAAA
1 CCCTAAA
1326 CCCT-AA
1 CCCTAAA
1332 CCCTAAA
1 CCCTAAA
1339 CCCT-AA
1 CCCTAAA
1345 -CCTAAA
1 CCCTAAA
1351 CCCT-AA
1 CCCTAAA
1357 CCCTAAA
1 CCCTAAA
1364 CCCTAAAA
1 CCCT-AAA
1372 CCCTAAA
1 CCCTAAA
1379 CCCTAAA
1 CCCTAAA
1386 CCCTAAA
1 CCCTAAA
1393 CCCTAAA
1 CCCTAAA
*
1400 CCCGAAA
1 CCCTAAA
1407 CCCCT-AA
1 -CCCTAAA
1414 CCCT-AA
1 CCCTAAA
1420 CCCTAAA
1 CCCTAAA
1427 -CCTAAA
1 CCCTAAA
1433 CCCTAAA
1 CCCTAAA
1440 -CCTAAA
1 CCCTAAA
1446 CCCTAAA
1 CCCTAAA
1453 CCCTAAA
1 CCCTAAA
1460 CCCTAAA
1 CCCTAAA
1467 CCCTAAA
1 CCCTAAA
1474 CCCTAAA
1 CCCTAAA
1481 CCCT-AA
1 CCCTAAA
1487 CCCTAAA
1 CCCTAAA
1494 CCCTAAA
1 CCCTAAA
1501 CCCT-AA
1 CCCTAAA
1507 CCCTAAA
1 CCCTAAA
1514 CCCTAAA
1 CCCTAAA
1521 CCCTAAAA
1 CCCT-AAA
1529 CCCTAAA
1 CCCTAAA
1536 -CCTAAA
1 CCCTAAA
1542 CCCT-AA
1 CCCTAAA
1548 CCCTAAA
1 CCCTAAA
1555 CCCTAAA
1 CCCTAAA
1562 CCCTAAA
1 CCCTAAA
1569 CCCTAAA
1 CCCTAAA
1576 CCCT-AA
1 CCCTAAA
1582 CACCTAAA
1 C-CCTAAA
1590 CCCTAAA
1 CCCTAAA
1597 CCCT-AA
1 CCCTAAA
1603 CCCTAAA
1 CCCTAAA
1610 CCCT-AA
1 CCCTAAA
1616 CCCTAAA
1 CCCTAAA
*
1623 CCCT-CA
1 CCCTAAA
1629 CCCTAAA
1 CCCTAAA
1636 CCCTAAA
1 CCCTAAA
1643 CCCTAAA
1 CCCTAAA
1650 CCCTAAA
1 CCCTAAA
*
1657 CCCGAAA
1 CCCTAAA
1664 CCCTAAA
1 CCCTAAA
1671 CCCTAAA
1 CCCTAAA
1678 CCCTAAA
1 CCCTAAA
1685 CCCTAAA
1 CCCTAAA
1692 CCCTAAA
1 CCCTAAA
1699 CCCTAAA
1 CCCTAAA
1706 CCCTAAA
1 CCCTAAA
1713 CCCTAAA
1 CCCTAAA
1720 CCCTAAA
1 CCCTAAA
1727 CCCTAAA
1 CCCTAAA
1734 CCCTAAA
1 CCCTAAA
1741 CCCTAAA
1 CCCTAAA
1748 CCCTAAA
1 CCCTAAA
1755 CCCTAAA
1 CCCTAAA
1762 CCCT-AA
1 CCCTAAA
1768 CCCT-AA
1 CCCTAAA
1774 CCCTAAA
1 CCCTAAA
1781 CCCTAAA
1 CCCTAAA
1788 CCCTAAA
1 CCCTAAA
1795 CCCT-AA
1 CCCTAAA
1801 CCCTAAA
1 CCCTAAA
1808 -CCTAAA
1 CCCTAAA
1814 CCCTAAA
1 CCCTAAA
1821 -CCTAAA
1 CCCTAAA
1827 CCCTAAA
1 CCCTAAA
1834 CCCTAAA
1 CCCTAAA
1841 CCCTAAA
1 CCCTAAA
1848 -CCT-AA
1 CCCTAAA
1853 CCCTAAA
1 CCCTAAA
1860 CCCT-AA
1 CCCTAAA
1866 CCCTAAA
1 CCCTAAA
1873 CCCTAAA
1 CCCTAAA
1880 -CCTAAA
1 CCCTAAA
1886 CCCTAAA
1 CCCTAAA
1893 CCCTAAA
1 CCCTAAA
1900 CCCTAAA
1 CCCTAAA
1907 CCCTAAA
1 CCCTAAA
1914 CCCTAAA
1 CCCTAAA
1921 CCCTAAA
1 CCCTAAA
1928 CCCCTAAA
1 -CCCTAAA
1936 CCCTAAA
1 CCCTAAA
1943 CCCTAAA
1 CCCTAAA
1950 CCCTAAAA
1 CCCT-AAA
1958 CCCTAAA
1 CCCTAAA
1965 CCCTAAA
1 CCCTAAA
1972 CCCT-AA
1 CCCTAAA
1978 -CCTAAA
1 CCCTAAA
1984 CCCTAAA
1 CCCTAAA
1991 CCCTAAA
1 CCCTAAA
1998 CCCTAAA
1 CCCTAAA
2005 -CCTAAA
1 CCCTAAA
2011 CCCTAAA
1 CCCTAAA
2018 CCCT-AA
1 CCCTAAA
2024 CCCTAAA
1 CCCTAAA
*
2031 CCCGAAA
1 CCCTAAA
2038 CCC-AAA
1 CCCTAAA
2044 CCCT--A
1 CCCTAAA
2049 CCCTAAA
1 CCCTAAA
*
2056 CCC-GAA
1 CCCTAAA
2062 CCCTAAA
1 CCCTAAA
2069 CCCT-AA
1 CCCTAAA
2075 CCCTAAA
1 CCCTAAA
2082 CCCTAAA
1 CCCTAAA
2089 -CCTAAA
1 CCCTAAA
2095 -CCTAAA
1 CCCTAAA
2101 CCCTAAA
1 CCCTAAA
2108 CCCTAAA
1 CCCTAAA
2115 CCCT-AA
1 CCCTAAA
2121 CCCT-AA
1 CCCTAAA
*
2127 CCCTAAC
1 CCCTAAA
2134 CCCTAAAA
1 CCCT-AAA
2142 CCCTAAA
1 CCCTAAA
2149 CCCT-AA
1 CCCTAAA
2155 CCCTAAA
1 CCCTAAA
2162 CCCTAAA
1 CCCTAAA
*
2169 -CCGAAA
1 CCCTAAA
2175 CCCTAAA
1 CCCTAAA
2182 CCCTAAA
1 CCCTAAA
2189 CCCTAAA
1 CCCTAAA
2196 CCCTAAA
1 CCCTAAA
2203 CCCTAAA
1 CCCTAAA
2210 CCCTAAA
1 CCCTAAA
2217 CCCTAAA
1 CCCTAAA
2224 CCCTAAA
1 CCCTAAA
*
2231 ACCTAAA
1 CCCTAAA
2238 CCCTAAA
1 CCCTAAA
2245 -CC--AA
1 CCCTAAA
2249 CCCT-AA
1 CCCTAAA
2255 CCC-AAA
1 CCCTAAA
2261 CCCTAAA
1 CCCTAAA
2268 CCCTAAA
1 CCCTAAA
*
2275 CCCTAAC
1 CCCTAAA
2282 CCCT-AA
1 CCCTAAA
2288 CCCTAAA
1 CCCTAAA
2295 -CC-AAA
1 CCCTAAA
2300 CCCT-AA
1 CCCTAAA
2306 CCCTAAA
1 CCCTAAA
2313 CCCTAAA
1 CCCTAAA
2320 CCCT-AA
1 CCCTAAA
2326 CCCTAAA
1 CCCTAAA
2333 CCCTAAA
1 CCCTAAA
2340 CCC-AAA
1 CCCTAAA
*
2346 ACCT-AA
1 CCCTAAA
2352 CCCT-AA
1 CCCTAAA
2358 CCCTAAA
1 CCCTAAA
2365 CCCT-AA
1 CCCTAAA
2371 CCCTAAA
1 CCCTAAA
2378 CCCTAAA
1 CCCTAAA
2385 CCCTAAA
1 CCCTAAA
2392 CCCTAAA
1 CCCTAAA
2399 CCCTAAA
1 CCCTAAA
2406 CCCTAAA
1 CCCTAAA
2413 CCCT-AA
1 CCCTAAA
2419 CCCTAAA
1 CCCTAAA
2426 CCCTAAA
1 CCCTAAA
2433 CCCTAAA
1 CCCTAAA
2440 CCCTAAA
1 CCCTAAA
2447 -CC-AAA
1 CCCTAAA
2452 CCCTAAA
1 CCCTAAA
2459 CCCTAAA
1 CCCTAAA
2466 CCCTAAAA
1 CCCT-AAA
2474 CCCT-AA
1 CCCTAAA
2480 CCCTAAA
1 CCCTAAA
2487 CCCCCCT-AA
1 ---CCCTAAA
2496 CCCTAAA
1 CCCTAAA
2503 -CCTAAA
1 CCCTAAA
2509 CCC-AAA
1 CCCTAAA
2515 CCCTAAA
1 CCCTAAA
*
2522 -CCGAAA
1 CCCTAAA
2528 -CCT-AA
1 CCCTAAA
2533 CCCTAAA
1 CCCTAAA
2540 CCCT-AA
1 CCCTAAA
2546 CCCTAAA
1 CCCTAAA
2553 CCCTAAA
1 CCCTAAA
2560 CCCTAAA
1 CCCTAAA
2567 CCCT-AA
1 CCCTAAA
2573 CCCTAAA
1 CCCTAAA
2580 CCCTAAA
1 CCCTAAA
2587 CCCTAAA
1 CCCTAAA
2594 CCCT-AA
1 CCCTAAA
2600 CCCTAAA
1 CCCTAAA
2607 CCCTAAAA
1 CCCT-AAA
2615 CCCTAAA
1 CCCTAAA
2622 CCCTAAA
1 CCCTAAA
2629 CCCTAAA
1 CCCTAAA
2636 CCCTAAA
1 CCCTAAA
2643 CCCT-AA
1 CCCTAAA
2649 CCCTAAA
1 CCCTAAA
2656 CCCTAAA
1 CCCTAAA
2663 CCCTAAA
1 CCCTAAA
*
2670 CCC---C
1 CCCTAAA
2674 CCCT-AA
1 CCCTAAA
2680 CCCT-AA
1 CCCTAAA
2686 CCCTAAA
1 CCCTAAA
2693 CCCTAAA
1 CCCTAAA
2700 CCCTAAA
1 CCCTAAA
2707 CCCTAAA
1 CCCTAAA
2714 -CCTAAA
1 CCCTAAA
2720 CCCTAAA
1 CCCTAAA
*
2727 CCCCAAA
1 CCCTAAA
2734 CCCT-AA
1 CCCTAAA
2740 -CCTAAA
1 CCCTAAA
2746 CCCTAAA
1 CCCTAAA
2753 CCCT-AA
1 CCCTAAA
2759 CCCT-AA
1 CCCTAAA
2765 CCCT-AA
1 CCCTAAA
2771 CCCTAAA
1 CCCTAAA
2778 CCCTAAA
1 CCCTAAA
2785 CCCTAAA
1 CCCTAAA
2792 CCCTAAA
1 CCCTAAA
2799 CCCTAAA
1 CCCTAAA
2806 CCCTAAA
1 CCCTAAA
2813 -CCTAAA
1 CCCTAAA
2819 CCCT-AA
1 CCCTAAA
2825 CCCT-AA
1 CCCTAAA
2831 CCCT-AA
1 CCCTAAA
2837 CCCTAAA
1 CCCTAAA
*
2844 ACCT-AA
1 CCCTAAA
2850 CCCTAAA
1 CCCTAAA
2857 CCCT-AA
1 CCCTAAA
2863 CCCT-AA
1 CCCTAAA
2869 CCCTAAA
1 CCCTAAA
2876 CCCTAAA
1 CCCTAAA
2883 CCCTAAA
1 CCCTAAA
2890 CCCTAAA
1 CCCTAAA
2897 CCCTAAA
1 CCCTAAA
2904 -CCTAAA
1 CCCTAAA
2910 CCCTAAA
1 CCCTAAA
2917 CCCTAAA
1 CCCTAAA
2924 CCCTAAA
1 CCCTAAA
2931 CCCTAAA
1 CCCTAAA
2938 CCCTAAA
1 CCCTAAA
2945 CCCTAAA
1 CCCTAAA
2952 CCCT-AA
1 CCCTAAA
2958 CCCTAAA
1 CCCTAAA
2965 CCCTAAA
1 CCCTAAA
2972 CCCTAAA
1 CCCTAAA
2979 -CCT-AA
1 CCCTAAA
2984 CCCT-AA
1 CCCTAAA
2990 CCCTAAA
1 CCCTAAA
2997 CCCTAAAA
1 CCCT-AAA
3005 CCCTAAA
1 CCCTAAA
3012 -CCTAAA
1 CCCTAAA
3018 -CCTAAA
1 CCCTAAA
3024 CCCTAAA
1 CCCTAAA
3031 CCC--AA
1 CCCTAAA
3036 CCCTAAA
1 CCCTAAA
3043 CCCTAAA
1 CCCTAAA
3050 CCCTAAA
1 CCCTAAA
3057 CCCTAAA
1 CCCTAAA
3064 -CCTAAA
1 CCCTAAA
3070 CCCTAAA
1 CCCTAAA
*
3077 CCCGAAA
1 CCCTAAA
3084 CCCTAAA
1 CCCTAAA
3091 CCCTAAA
1 CCCTAAA
3098 CCCTAAA
1 CCCTAAA
3105 -CCTAAA
1 CCCTAAA
3111 -CCTAAA
1 CCCTAAA
3117 CCCTAAA
1 CCCTAAA
3124 CCCTAAA
1 CCCTAAA
3131 CCCTAAA
1 CCCTAAA
3138 CCCTAAA
1 CCCTAAA
3145 CCCTAAA
1 CCCTAAA
3152 CCCTAAA
1 CCCTAAA
3159 CCCTAAA
1 CCCTAAA
3166 -CCT--A
1 CCCTAAA
3170 CCCTAAA
1 CCCTAAA
3177 CCCTAAA
1 CCCTAAA
3184 CCCTAAA
1 CCCTAAA
3191 CCCT-AA
1 CCCTAAA
3197 CCCTAAA
1 CCCTAAA
3204 CCCT-AA
1 CCCTAAA
3210 CCCTAAA
1 CCCTAAA
3217 CCCTAAA
1 CCCTAAA
3224 CCCTAAA
1 CCCTAAA
3231 CCCT-AA
1 CCCTAAA
3237 CCCTAAA
1 CCCTAAA
3244 CCCTAAA
1 CCCTAAA
3251 CCCTAAA
1 CCCTAAA
3258 CCCTAAA
1 CCCTAAA
3265 CCCTAAA
1 CCCTAAA
3272 CCCTAAA
1 CCCTAAA
3279 -CCTAAA
1 CCCTAAA
3285 CCCTAAA
1 CCCTAAA
3292 CCCTAAA
1 CCCTAAA
3299 CCCTAAA
1 CCCTAAA
3306 CCCTAAA
1 CCCTAAA
3313 CCCT-AA
1 CCCTAAA
3319 CCCTAAA
1 CCCTAAA
3326 CCCTAAA
1 CCCTAAA
3333 CCCTAAA
1 CCCTAAA
3340 CCCTAAA
1 CCCTAAA
3347 CCCTAAA
1 CCCTAAA
3354 CCCT-AA
1 CCCTAAA
3360 CCCT-AA
1 CCCTAAA
3366 CCCTAAA
1 CCCTAAA
3373 -CCTAAA
1 CCCTAAA
3379 CCCTAAA
1 CCCTAAA
3386 CCCTAAA
1 CCCTAAA
3393 CCCT-AA
1 CCCTAAA
3399 CCCTAAA
1 CCCTAAA
3406 CCCTAAA
1 CCCTAAA
3413 CCCT-AA
1 CCCTAAA
3419 CCCTAAA
1 CCCTAAA
3426 CCCTAAA
1 CCCTAAA
3433 CCCTAAA
1 CCCTAAA
3440 CCCTAAAA
1 CCCT-AAA
3448 CCCT-AA
1 CCCTAAA
3454 CCCTAAA
1 CCCTAAA
3461 CCCTAAA
1 CCCTAAA
3468 CCC-AAA
1 CCCTAAA
3474 CCCT-AA
1 CCCTAAA
3480 CCCT-AA
1 CCCTAAA
3486 CCCT-AA
1 CCCTAAA
3492 CCCTAAA
1 CCCTAAA
3499 CCCTAAA
1 CCCTAAA
3506 CCCT-AA
1 CCCTAAA
3512 CCCTAAA
1 CCCTAAA
3519 CCCTAAA
1 CCCTAAA
3526 CCTACTAAA
1 CC--CTAAA
3535 CCCT-AA
1 CCCTAAA
3541 CCCT-AA
1 CCCTAAA
3547 CCCTAAA
1 CCCTAAA
3554 CCCTAAA
1 CCCTAAA
3561 CCCT-AA
1 CCCTAAA
3567 -CCTAAA
1 CCCTAAA
*
3573 CCCGAAA
1 CCCTAAA
3580 CCCT-AA
1 CCCTAAA
3586 CCCTAAA
1 CCCTAAA
3593 CCCT-AA
1 CCCTAAA
3599 CCCTAAA
1 CCCTAAA
3606 -CC-AAA
1 CCCTAAA
3611 -CCTAAA
1 CCCTAAA
3617 CCCTAAA
1 CCCTAAA
3624 CCCTAAA
1 CCCTAAA
3631 CCCTAAA
1 CCCTAAA
3638 CCCT-AA
1 CCCTAAA
3644 CCCTAAA
1 CCCTAAA
3651 CCCTAAA
1 CCCTAAA
3658 CCCTAAA
1 CCCTAAA
3665 CCCTAAA
1 CCCTAAA
3672 CCCT-AA
1 CCCTAAA
3678 CCCTAAA
1 CCCTAAA
3685 CCCT--A
1 CCCTAAA
3690 CCCTAAA
1 CCCTAAA
3697 CCCTAAA
1 CCCTAAA
3704 CCCTAAA
1 CCCTAAA
3711 CCCTAAA
1 CCCTAAA
3718 CCCT-AA
1 CCCTAAA
3724 CCCTAAA
1 CCCTAAA
3731 CCCTAAA
1 CCCTAAA
3738 CCCTAAA
1 CCCTAAA
3745 CCCTAAA
1 CCCTAAA
3752 CCCTAAA
1 CCCTAAA
3759 CCCTAAA
1 CCCTAAA
3766 CCCTAAA
1 CCCTAAA
3773 -CCTAAA
1 CCCTAAA
3779 CCCTAAA
1 CCCTAAA
3786 CCCTAAA
1 CCCTAAA
3793 CCCTAAA
1 CCCTAAA
3800 CCCTAAA
1 CCCTAAA
3807 CCCTAAA
1 CCCTAAA
3814 CCCTAAA
1 CCCTAAA
3821 CCCTAAA
1 CCCTAAA
3828 CCCTAAA
1 CCCTAAA
3835 CCCTAAA
1 CCCTAAA
3842 CCCTAAA
1 CCCTAAA
3849 CCCTAAA
1 CCCTAAA
3856 CCCTAAA
1 CCCTAAA
3863 -CCT-AA
1 CCCTAAA
3868 -CCTAAA
1 CCCTAAA
3874 -CCT--A
1 CCCTAAA
3878 CCCTAAA
1 CCCTAAA
3885 CCCTAAA
1 CCCTAAA
3892 CCCTAAA
1 CCCTAAA
3899 CCCTAAA
1 CCCTAAA
3906 CCCTAAA
1 CCCTAAA
3913 -CC-AAA
1 CCCTAAA
3918 CCCTAAA
1 CCCTAAA
3925 CCCTAAA
1 CCCTAAA
3932 CCCT-AA
1 CCCTAAA
3938 CCCTAAA
1 CCCTAAA
3945 -CCTAAA
1 CCCTAAA
3951 CCCTAAA
1 CCCTAAA
3958 CCCT-AA
1 CCCTAAA
3964 CCCTAAA
1 CCCTAAA
3971 CCCTAAA
1 CCCTAAA
*
3978 CCCGAAA
1 CCCTAAA
3985 -CCTAAA
1 CCCTAAA
3991 CCCTAAA
1 CCCTAAA
3998 CCCTAAA
1 CCCTAAA
4005 CCCTAAA
1 CCCTAAA
4012 CCCTAAA
1 CCCTAAA
4019 -CCT-AA
1 CCCTAAA
4024 CCCTAAA
1 CCCTAAA
4031 CCCCTAAA
1 -CCCTAAA
4039 -CCTAAA
1 CCCTAAA
4045 CCCTAAA
1 CCCTAAA
4052 CCCT-AA
1 CCCTAAA
4058 CCCT-AA
1 CCCTAAA
4064 CCCT-AA
1 CCCTAAA
*
4070 CCC--GA
1 CCCTAAA
4075 CCCTAAA
1 CCCTAAA
4082 CCCTAAA
1 CCCTAAA
4089 CCCTAAA
1 CCCTAAA
4096 CCCT-AA
1 CCCTAAA
4102 CCCTAAA
1 CCCTAAA
4109 CCCT-AA
1 CCCTAAA
4115 CCCT-AA
1 CCCTAAA
4121 CCCTAAA
1 CCCTAAA
4128 CCCTAAA
1 CCCTAAA
4135 -CCTAAA
1 CCCTAAA
4141 CCCTAAA
1 CCCTAAA
4148 CCCTAAA
1 CCCTAAA
4155 -CCTAAA
1 CCCTAAA
*
4161 CCCTCAA
1 CCCTAAA
4168 CCCTAAA
1 CCCTAAA
*
4175 ACCTAAA
1 CCCTAAA
4182 CCCTAAAAA
1 CCCT--AAA
4191 CCCT-AA
1 CCCTAAA
4197 CCCTAAA
1 CCCTAAA
4204 CCCTAAA
1 CCCTAAA
4211 CCCTAAA
1 CCCTAAA
4218 CCCT-AA
1 CCCTAAA
4224 -CCTAAA
1 CCCTAAA
4230 -CCTAAA
1 CCCTAAA
4236 CCCTAAAA
1 CCCT-AAA
4244 CCCT-AA
1 CCCTAAA
*
4250 CCC--AC
1 CCCTAAA
4255 CCCTAAA
1 CCCTAAA
4262 CCCCTAAA
1 -CCCTAAA
4270 CCCT-AA
1 CCCTAAA
4276 CCC-AAA
1 CCCTAAA
4282 CCCTAAAA
1 CCCT-AAA
4290 CCCTAAA
1 CCCTAAA
4297 CCCTAAA
1 CCCTAAA
4304 CCCT-AA
1 CCCTAAA
4310 CCCT-AA
1 CCCTAAA
4316 -CCT-AA
1 CCCTAAA
4321 CCCTAAA
1 CCCTAAA
4328 CCCTAAA
1 CCCTAAA
4335 CCCTAAA
1 CCCTAAA
4342 -CCTAAA
1 CCCTAAA
4348 CCCTAAA
1 CCCTAAA
4355 CCCTAAA
1 CCCTAAA
*
4362 ACC--AA
1 CCCTAAA
4367 CCCTAAA
1 CCCTAAA
4374 CCCT-AA
1 CCCTAAA
4380 CCCTAAA
1 CCCTAAA
4387 CCCT-AA
1 CCCTAAA
4393 CCCTAAA
1 CCCTAAA
4400 -CCTAAA
1 CCCTAAA
4406 CCCTAAA
1 CCCTAAA
4413 CCCT-AA
1 CCCTAAA
4419 -CCTAAA
1 CCCTAAA
4425 CCCTAAA
1 CCCTAAA
4432 -CC-AAA
1 CCCTAAA
4437 CCCT-AA
1 CCCTAAA
4443 CCC--AA
1 CCCTAAA
4448 CCCT-AA
1 CCCTAAA
4454 CCCTAAA
1 CCCTAAA
4461 CCCTAAA
1 CCCTAAA
4468 CCCTAAA
1 CCCTAAA
4475 -CCTAAA
1 CCCTAAA
*
4481 -CC--GA
1 CCCTAAA
4485 CCCTAAA
1 CCCTAAA
4492 CCCT-AA
1 CCCTAAA
4498 CCCTAAAA
1 CCCT-AAA
4506 CCCTAAAA
1 CCCT-AAA
4514 CCCTAAA
1 CCCTAAA
4521 CCCTAAA
1 CCCTAAA
4528 CCCCCTAAA
1 --CCCTAAA
4537 CCC-AAA
1 CCCTAAA
4543 CCCTAAA
1 CCCTAAA
4550 CCCTAAA
1 CCCTAAA
4557 CCCTAAA
1 CCCTAAA
4564 CCCTAAA
1 CCCTAAA
4571 CCCTAAA
1 CCCTAAA
4578 CCCTAAA
1 CCCTAAA
4585 CCCT-AA
1 CCCTAAA
4591 CCCTAAA
1 CCCTAAA
4598 CCCTAAA
1 CCCTAAA
4605 CCCTAAA
1 CCCTAAA
4612 CCCTAAA
1 CCCTAAA
4619 CCCTAAA
1 CCCTAAA
4626 CCCT-AA
1 CCCTAAA
4632 CCCTAAA
1 CCCTAAA
4639 CCCTAAA
1 CCCTAAA
4646 CCCTAAA
1 CCCTAAA
4653 CCCTAAA
1 CCCTAAA
4660 -CCTAAA
1 CCCTAAA
4666 CCCT-AA
1 CCCTAAA
4672 CCCTAAAA
1 CCCT-AAA
4680 CCCTAAA
1 CCCTAAA
4687 CCCTAAA
1 CCCTAAA
4694 CCCT-AA
1 CCCTAAA
4700 CCCTAAA
1 CCCTAAA
4707 CCCTAAA
1 CCCTAAA
4714 CCCTAAA
1 CCCTAAA
4721 CCCTAAA
1 CCCTAAA
4728 CCCTAAA
1 CCCTAAA
4735 CCCTAAA
1 CCCTAAA
4742 CCCTAAA
1 CCCTAAA
4749 CCCTAAA
1 CCCTAAA
4756 CCCTAAAA
1 CCCT-AAA
4764 CCCTAAA
1 CCCTAAA
4771 CCCTAAA
1 CCCTAAA
4778 CCCTAAA
1 CCCTAAA
4785 CCCTAAA
1 CCCTAAA
4792 CCCTAAA
1 CCCTAAA
4799 CCCT-AA
1 CCCTAAA
4805 CCCTAAA
1 CCCTAAA
4812 CCCTAAA
1 CCCTAAA
4819 CCCTAAA
1 CCCTAAA
4826 CCCTAAA
1 CCCTAAA
4833 CCCTAAA
1 CCCTAAA
4840 CCCTAAA
1 CCCTAAA
4847 CCCTAAA
1 CCCTAAA
4854 CCCTAAA
1 CCCTAAA
4861 CCCTAAA
1 CCCTAAA
4868 CCCTAAA
1 CCCTAAA
4875 CCCTAAA
1 CCCTAAA
4882 CCCT-AA
1 CCCTAAA
4888 CCCTAAA
1 CCCTAAA
4895 CCCTAAAA
1 CCCT-AAA
4903 CCCTAAA
1 CCCTAAA
4910 -CCT-AA
1 CCCTAAA
4915 CCCTAAA
1 CCCTAAA
4922 CCCTAAA
1 CCCTAAA
4929 CCCTAAA
1 CCCTAAA
4936 CCCTAAA
1 CCCTAAA
4943 CCCT-AA
1 CCCTAAA
4949 CCCTAAA
1 CCCTAAA
4956 CCCTAAA
1 CCCTAAA
4963 CCCTAAA
1 CCCTAAA
4970 CCCT-AA
1 CCCTAAA
4976 CCCT-AA
1 CCCTAAA
4982 CCCT-AA
1 CCCTAAA
4988 CCCTAAA
1 CCCTAAA
*
4995 -CCGAAA
1 CCCTAAA
5001 CCCTAAA
1 CCCTAAA
5008 CCCTAAA
1 CCCTAAA
5015 CCCT-AA
1 CCCTAAA
5021 CCCTAAA
1 CCCTAAA
5028 CCCTAAA
1 CCCTAAA
5035 CCCTAAA
1 CCCTAAA
5042 CCCTAAA
1 CCCTAAA
5049 CCCTAAA
1 CCCTAAA
5056 -CCTAAA
1 CCCTAAA
5062 CCCT-AA
1 CCCTAAA
5068 CCCTAAA
1 CCCTAAA
5075 CCCTAAA
1 CCCTAAA
5082 CCCTAAA
1 CCCTAAA
5089 CCCTAAA
1 CCCTAAA
5096 CCCTAAA
1 CCCTAAA
5103 CCCT-AA
1 CCCTAAA
5109 CCCTAAA
1 CCCTAAA
5116 CCCTAAA
1 CCCTAAA
5123 CCCTAAA
1 CCCTAAA
5130 CCCTAAA
1 CCCTAAA
5137 CCCTAAA
1 CCCTAAA
5144 -CCTAAA
1 CCCTAAA
5150 CCCTAAA
1 CCCTAAA
5157 CCCTAAA
1 CCCTAAA
5164 CCC---A
1 CCCTAAA
5168 CCCTAAA
1 CCCTAAA
5175 CCCTAAA
1 CCCTAAA
5182 CCCTAAA
1 CCCTAAA
5189 CCCT-AA
1 CCCTAAA
5195 CCCT--A
1 CCCTAAA
5200 CCCTAAAA
1 CCCT-AAA
5208 CCCTAAA
1 CCCTAAA
5215 CCCTAAA
1 CCCTAAA
5222 CCCTAAAA
1 CCCT-AAA
5230 CCCTAAA
1 CCCTAAA
5237 CCCTAAA
1 CCCTAAA
5244 CCC--AA
1 CCCTAAA
5249 CCCTAAA
1 CCCTAAA
5256 CCCTAAA
1 CCCTAAA
5263 CCCT-AA
1 CCCTAAA
5269 CCCTAAA
1 CCCTAAA
5276 CCCT-AA
1 CCCTAAA
5282 CCCTAAA
1 CCCTAAA
5289 CCCTAAA
1 CCCTAAA
5296 CCCTAAA
1 CCCTAAA
5303 CCCTAAA
1 CCCTAAA
5310 -CCTAAA
1 CCCTAAA
5316 CCCTAAA
1 CCCTAAA
5323 CCCTAAA
1 CCCTAAA
5330 CCCTAAA
1 CCCTAAA
5337 CCCTAAA
1 CCCTAAA
5344 CCCTAAA
1 CCCTAAA
5351 CCCT-AA
1 CCCTAAA
5357 CCCT-AA
1 CCCTAAA
5363 CCCT-AA
1 CCCTAAA
*
5369 CCCTAAC
1 CCCTAAA
5376 CCCT-AA
1 CCCTAAA
5382 CCCT-AA
1 CCCTAAA
5388 CCCTAAA
1 CCCTAAA
5395 CCCTAAA
1 CCCTAAA
5402 CCCTAAA
1 CCCTAAA
5409 CCCT-AA
1 CCCTAAA
5415 -CCTAAA
1 CCCTAAA
5421 CCCTAAA
1 CCCTAAA
5428 CCCTAAA
1 CCCTAAA
5435 CCCT-AA
1 CCCTAAA
5441 CCCTAAA
1 CCCTAAA
5448 CCCT-AA
1 CCCTAAA
5454 CCCTAAA
1 CCCTAAA
5461 CCCTAAA
1 CCCTAAA
5468 CCCTAAA
1 CCCTAAA
5475 CCCTAAA
1 CCCTAAA
5482 CCCTAAA
1 CCCTAAA
5489 CCCTAAA
1 CCCTAAA
5496 CCCTAAA
1 CCCTAAA
5503 CCCT-AA
1 CCCTAAA
5509 CCCT-AA
1 CCCTAAA
5515 CCCTAAA
1 CCCTAAA
5522 CCCTAAA
1 CCCTAAA
5529 -CCTAAA
1 CCCTAAA
5535 CCCTAAA
1 CCCTAAA
5542 CCCTAAA
1 CCCTAAA
5549 CCCT-AA
1 CCCTAAA
5555 CCCTAAA
1 CCCTAAA
5562 CCCTAAA
1 CCCTAAA
5569 CCCTAAA
1 CCCTAAA
5576 CCCTAAA
1 CCCTAAA
5583 CCCTAAA
1 CCCTAAA
*
5590 CCC--GA
1 CCCTAAA
5595 -CCTAAA
1 CCCTAAA
5601 -CCTAAA
1 CCCTAAA
5607 CCCTAAA
1 CCCTAAA
5614 CCCTAAA
1 CCCTAAA
5621 CCCTAAA
1 CCCTAAA
5628 CCCTAAA
1 CCCTAAA
5635 CCCTAAA
1 CCCTAAA
5642 CCCTAAA
1 CCCTAAA
5649 CCCTAAA
1 CCCTAAA
5656 CCCTAAA
1 CCCTAAA
5663 CCCTAAA
1 CCCTAAA
5670 CCCT-AA
1 CCCTAAA
5676 -CCTAAA
1 CCCTAAA
5682 CCCT-AA
1 CCCTAAA
5688 CCCTAAA
1 CCCTAAA
5695 CCCT-AA
1 CCCTAAA
5701 CCCTAAA
1 CCCTAAA
5708 CCCTAAA
1 CCCTAAA
5715 -CCTAAA
1 CCCTAAA
5721 CCCTAAA
1 CCCTAAA
5728 CCCTAAA
1 CCCTAAA
5735 CCCTAAA
1 CCCTAAA
5742 CCCTAAA
1 CCCTAAA
5749 CCCT-AA
1 CCCTAAA
5755 CCCTAAA
1 CCCTAAA
5762 CCCTAAA
1 CCCTAAA
5769 CCCTAAA
1 CCCTAAA
5776 CCCTAAA
1 CCCTAAA
5783 CCCTAAA
1 CCCTAAA
5790 CCCT-AA
1 CCCTAAA
5796 CCCTAAAA
1 CCCT-AAA
5804 CCCT-AA
1 CCCTAAA
5810 CCCTAAA
1 CCCTAAA
5817 CCCT-AA
1 CCCTAAA
5823 CCCTAAA
1 CCCTAAA
5830 CCCTAAA
1 CCCTAAA
5837 CCCT-AA
1 CCCTAAA
5843 CCCT-AA
1 CCCTAAA
5849 CCCT--A
1 CCCTAAA
5854 CCCTAAA
1 CCCTAAA
*
5861 CCCT-AC
1 CCCTAAA
5867 CCCT-AA
1 CCCTAAA
5873 CCCT-AA
1 CCCTAAA
5879 CCCT-AA
1 CCCTAAA
5885 CCCTAAA
1 CCCTAAA
5892 CCCTAAA
1 CCCTAAA
5899 CCCT-AA
1 CCCTAAA
5905 CCCTAAA
1 CCCTAAA
5912 CCCT-AA
1 CCCTAAA
5918 CCCTAAA
1 CCCTAAA
5925 CCCTAAA
1 CCCTAAA
5932 CCCTAAA
1 CCCTAAA
5939 CCCT-AA
1 CCCTAAA
5945 CCCTAAA
1 CCCTAAA
5952 CCCT-AA
1 CCCTAAA
5958 CCCTAAA
1 CCCTAAA
5965 -CCTAAA
1 CCCTAAA
5971 CCCTAAA
1 CCCTAAA
5978 CCCTAAA
1 CCCTAAA
5985 CCC--AA
1 CCCTAAA
5990 -CCTAAA
1 CCCTAAA
5996 CCCTAAA
1 CCCTAAA
6003 CCCTAAA
1 CCCTAAA
6010 -CCTAAA
1 CCCTAAA
6016 -CCT-AA
1 CCCTAAA
6021 CCCTAAA
1 CCCTAAA
6028 CCCT-AA
1 CCCTAAA
6034 CCCTAAA
1 CCCTAAA
6041 CCCTAAA
1 CCCTAAA
6048 CCC-AAA
1 CCCTAAA
6054 CCCTAAA
1 CCCTAAA
6061 CCCT-AA
1 CCCTAAA
6067 CCCTAACCTA
1 CCCTAA---A
*
6077 CCCTAACC
1 CCCTAA-A
6085 CCCTAAA
1 CCCTAAA
6092 -CCTAGAA
1 CCCTA-AA
6099 CCCT--A
1 CCCTAAA
6104 CCCTAAA
1 CCCTAAA
6111 CCCT-AA
1 CCCTAAA
6117 CCC-AAA
1 CCCTAAA
6123 CCCT-AA
1 CCCTAAA
*
6129 CCC--AC
1 CCCTAAA
6134 CCCT-AA
1 CCCTAAA
6140 CCCT-AA
1 CCCTAAA
6146 CCCT-AA
1 CCCTAAA
6152 CCCTAAA
1 CCCTAAA
6159 CCCT-AA
1 CCCTAAA
6165 CCCT-AA
1 CCCTAAA
6171 CCCT-AA
1 CCCTAAA
6177 CCCTAAA
1 CCCTAAA
6184 CCCTAAA
1 CCCTAAA
6191 CCCT-AA
1 CCCTAAA
6197 CCCT-AA
1 CCCTAAA
6203 CCCTAAA
1 CCCTAAA
*
6210 -CCTAAC
1 CCCTAAA
*
6216 CGACCTAGA
1 C--CCTAAA
*
6225 CCCTAGA
1 CCCTAAA
*
6232 CCCTAGA
1 CCCTAAA
*
6239 CCCTAGA
1 CCCTAAA
*
6246 CCCTAGA
1 CCCTAAA
*
6253 CCCTAGA
1 CCCTAAA
6260 CCCTAGAAA
1 CCCT--AAA
*
6269 CCCTAGA
1 CCCTAAA
*
6276 CCC-AGA
1 CCCTAAA
6282 CCCT--A
1 CCCTAAA
6287 CCCT-AA
1 CCCTAAA
*
6293 -CCTAGA
1 CCCTAAA
*
6299 CCC-AGA
1 CCCTAAA
6305 CCCT-AA
1 CCCTAAA
6311 CCCT--A
1 CCCTAAA
*
6316 -CCTAGA
1 CCCTAAA
6322 CCCT-AA
1 CCCTAAA
*
6328 CCCTAGA
1 CCCTAAA
6335 CCCTAAA
1 CCCTAAA
6342 -CCT-AA
1 CCCTAAA
*
6347 CCCTAGA
1 CCCTAAA
6354 CCCTAAA
1 CCCTAAA
*
6361 CCCTAGA
1 CCCTAAA
6368 CCCTACCTAA
1 CCCTA---AA
*
6378 CCCTAGA
1 CCCTAAA
*
6385 CCCTAGA
1 CCCTAAA
*
6392 CCCTAGA
1 CCCTAAA
*
6399 CCCTAGA
1 CCCTAAA
*
6406 CCCTAGA
1 CCCTAAA
6413 -CCT--A
1 CCCTAAA
*
6417 CCCTAGA
1 CCCTAAA
6424 CCCT--A
1 CCCTAAA
6429 CCCTAGAA
1 CCCTA-AA
*
6437 CCCTAGA
1 CCCTAAA
*
6444 CCCTAGA
1 CCCTAAA
*
6451 CCCTAGA
1 CCCTAAA
*
6458 CCCTAGA
1 CCCTAAA
*
6465 CCCTAGA
1 CCCTAAA
*
6472 CCCTAGA
1 CCCTAAA
*
6479 -CCTAGA
1 CCCTAAA
*
6485 CCCTAGA
1 CCCTAAA
*
6492 CCCTATA
1 CCCTAAA
* *
6499 CCCGAGA
1 CCCTAAA
*
6506 CCCTAGA
1 CCCTAAA
*
6513 CCCTAGA
1 CCCTAAA
*
6520 CCCTAGA
1 CCCTAAA
6527 CCCTAAA
1 CCCTAAA
* *
6534 ACCTAGA
1 CCCTAAA
*
6541 CCCTAGA
1 CCCTAAA
6548 CCCT-AA
1 CCCTAAA
*
6554 CCCTAGA
1 CCCTAAA
*
6561 CCCTAGA
1 CCCTAAA
*
6568 CCC--GA
1 CCCTAAA
*
6573 CCCTAGA
1 CCCTAAA
*
6580 CCCTAGA
1 CCCTAAA
*
6587 CCCTAGA
1 CCCTAAA
*
6594 CCCTAGA
1 CCCTAAA
*
6601 CCCTAGA
1 CCCTAAA
*
6608 CCCTAGA
1 CCCTAAA
6615 CCCT-AA
1 CCCTAAA
*
6621 CCCTAGA
1 CCCTAAA
*
6628 CCCTTAA
1 CCCTAAA
*
6635 CCCTAGA
1 CCCTAAA
*
6642 CCCTAGA
1 CCCTAAA
*
6649 CCC-GAA
1 CCCTAAA
*
6655 CCCTAGA
1 CCCTAAA
*
6662 CCC--GA
1 CCCTAAA
*
6667 CCCTAGA
1 CCCTAAA
*
6674 -CCTAGA
1 CCCTAAA
*
6680 CCCTAGA
1 CCCTAAA
*
6687 CCCTAGA
1 CCCTAAA
*
6694 -CCTAGA
1 CCCTAAA
*
6700 CCCTAGA
1 CCCTAAA
6707 CCCTAGAA
1 CCCTA-AA
*
6715 -CCTAGA
1 CCCTAAA
*
6721 -CCTAGA
1 CCCTAAA
*
6727 CCCTAGA
1 CCCTAAA
6734 CCCTAGAA
1 CCCTA-AA
*
6742 CCCTAGA
1 CCCTAAA
*
6749 -CCTAGA
1 CCCTAAA
*
6755 CCCTAGA
1 CCCTAAA
*
6762 CCCTAGA
1 CCCTAAA
*
6769 CCC-AGA
1 CCCTAAA
*
6775 CCCT--G
1 CCCTAAA
*
6780 CCCTAGA
1 CCCTAAA
*
6787 CCCTAGA
1 CCCTAAA
6794 CCCTAGAA
1 CCCTA-AA
*
6802 CCCTAGA
1 CCCTAAA
*
6809 CCCTAGA
1 CCCTAAA
6816 CCCT--A
1 CCCTAAA
*
6821 CCCTAGA
1 CCCTAAA
*
6828 CCCTAGA
1 CCCTAAA
*
6835 CCCTAGA
1 CCCTAAA
*
6842 CCCTAGA
1 CCCTAAA
*
6849 -CCTAGA
1 CCCTAAA
6855 CCCT-AA
1 CCCTAAA
**
6861 -CCTAGC
1 CCCTAAA
*
6867 CCCTAGA
1 CCCTAAA
*
6874 CCCTAGA
1 CCCTAAA
*
6881 CCCTAGA
1 CCCTAAA
*
6888 CCCTAGA
1 CCCTAAA
*
6895 CCCTAGA
1 CCCTAAA
6902 CCCTAGAGA
1 CCCTA-A-A
6911 CCCTAGAGA
1 CCCTA-A-A
*
6920 CCCTAGA
1 CCCTAAA
*
6927 CCCTAGA
1 CCCTAAA
*
6934 CCCTAGA
1 CCCTAAA
*
6941 -CCTAGA
1 CCCTAAA
*
6947 CCCTAGA
1 CCCTAAA
6954 CCCT-AA
1 CCCTAAA
*
6960 CCCTAGA
1 CCCTAAA
*
6967 CCCTAGA
1 CCCTAAA
*
6974 CCCTAGA
1 CCCTAAA
*
6981 CCCTAGA
1 CCCTAAA
*
6988 CCCTAGA
1 CCCTAAA
*
6995 CCCTAGA
1 CCCTAAA
*
7002 CCCTAGA
1 CCCTAAA
*
7009 CCCTAGA
1 CCCTAAA
*
7016 CCCTAGA
1 CCCTAAA
*
7023 -CCTAGA
1 CCCTAAA
7029 CCCT-AA
1 CCCTAAA
*
7035 CCCTAGA
1 CCCTAAA
7042 CCCT--A
1 CCCTAAA
*
7047 CCCTAGA
1 CCCTAAA
*
7054 CCCTAGA
1 CCCTAAA
*
7061 CCCT-AG
1 CCCTAAA
*
7067 CCC-AGA
1 CCCTAAA
*
7073 CCCTAGA
1 CCCTAAA
*
7080 CCCTAGA
1 CCCTAAA
*
7087 CCCTAGA
1 CCCTAAA
*
7094 CCCTAGA
1 CCCTAAA
*
7101 CCCTAGA
1 CCCTAAA
*
7108 CCCTAGA
1 CCCTAAA
*
7115 -CCTAGA
1 CCCTAAA
*
7121 CCCTAGA
1 CCCTAAA
7128 CCCT-AA
1 CCCTAAA
*
7134 CCCTAGA
1 CCCTAAA
*
7141 CCCTAGA
1 CCCTAAA
*
7148 -CCTAGA
1 CCCTAAA
7154 CCCTAGAA
1 CCCTA-AA
*
7162 -CCTAGA
1 CCCTAAA
*
7168 CCCTAGA
1 CCCTAAA
*
7175 CCCTAGA
1 CCCTAAA
*
7182 CCCTAGA
1 CCCTAAA
*
7189 -CCTAGA
1 CCCTAAA
*
7195 CCCTAGA
1 CCCTAAA
7202 CCCT-AA
1 CCCTAAA
*
7208 CCCTAGA
1 CCCTAAA
*
7215 CCCTAGA
1 CCCTAAA
*
7222 -CC-AGA
1 CCCTAAA
*
7227 CCCTAGA
1 CCCTAAA
*
7234 CCCTAGA
1 CCCTAAA
*
7241 CCCTAGA
1 CCCTAAA
*
7248 CCCTAGA
1 CCCTAAA
*
7255 CCCTAGA
1 CCCTAAA
*
7262 CCCTAGA
1 CCCTAAA
*
7269 CCCTAGA
1 CCCTAAA
*
7276 CCCTAGA
1 CCCTAAA
*
7283 CCCTAGA
1 CCCTAAA
*
7290 CCCTAGA
1 CCCTAAA
*
7297 CCCTAGA
1 CCCTAAA
*
7304 CCC-AGA
1 CCCTAAA
*
7310 CCCTAGA
1 CCCTAAA
*
7317 CCCTAGA
1 CCCTAAA
*
7324 CCCTAGA
1 CCCTAAA
*
7331 -CCTAGACC
1 CCCTA-A-A
*
7339 CCCTAGA
1 CCCTAAA
*
7346 CCCTAGA
1 CCCTAAA
*
7353 CCCTAGA
1 CCCTAAA
*
7360 CCCTAGA
1 CCCTAAA
7367 -CCT-AA
1 CCCTAAA
*
7372 CCCTAGA
1 CCCTAAA
*
7379 CCCTAGA
1 CCCTAAA
*
7386 CCCTAGA
1 CCCTAAA
*
7393 CCCTAGA
1 CCCTAAA
*
7400 -CCTAGA
1 CCCTAAA
*
7406 CCCTAGA
1 CCCTAAA
* *
7413 CCATAGA
1 CCCTAAA
*
7420 CCCTAGA
1 CCCTAAA
*
7427 CCCTAGA
1 CCCTAAA
*
7434 CCCTAGA
1 CCCTAAA
*
7441 CCCTAGA
1 CCCTAAA
*
7448 CCCTAGA
1 CCCTAAA
*
7455 CCCTAGA
1 CCCTAAA
*
7462 CCCTAGACC
1 CCCTA-A-A
*
7471 CCCTAGA
1 CCCTAAA
*
7478 CCCTAGA
1 CCCTAAA
*
7485 CCCTAGA
1 CCCTAAA
*
7492 CCCTAGA
1 CCCTAAA
*
7499 CCCTAGA
1 CCCTAAA
*
7506 CCCTAGA
1 CCCTAAA
*
7513 CCCTAGA
1 CCCTAAA
*
7520 CCCTAGA
1 CCCTAAA
*
7527 CCCTAGA
1 CCCTAAA
*
7534 CCCTAGA
1 CCCTAAA
*
7541 CCCTAGA
1 CCCTAAA
*
7548 CCCTAGA
1 CCCTAAA
*
7555 CCCTAGA
1 CCCTAAA
*
7562 CCCTAGA
1 CCCTAAA
*
7569 CCCTAGA
1 CCCTAAA
*
7576 CCCTAGA
1 CCCTAAA
*
7583 CCCTAGA
1 CCCTAAA
*
7590 CCCTAGA
1 CCCTAAA
*
7597 CCCTAGA
1 CCCTAAA
*
7604 CCCTAGA
1 CCCTAAA
*
7611 CCCTAGA
1 CCCTAAA
*
7618 CCCTAGA
1 CCCTAAA
*
7625 CCCTAGA
1 CCCTAAA
*
7632 CCCTAGA
1 CCCTAAA
*
7639 CCCTAGA
1 CCCTAAA
*
7646 CCCTAGA
1 CCCTAAA
*
7653 CCCTAGA
1 CCCTAAA
*
7660 CCCTAGA
1 CCCTAAA
*
7667 CCCTAGA
1 CCCTAAA
*
7674 CCCTAGA
1 CCCTAAA
*
7681 CCCTAGA
1 CCCTAAA
*
7688 CCCTAGA
1 CCCTAAA
*
7695 CCCTAGA
1 CCCTAAA
*
7702 CCCTAGA
1 CCCTAAA
*
7709 CCCTAGA
1 CCCTAAA
*
7716 CCCTAGA
1 CCCTAAA
*
7723 CCCTAGA
1 CCCTAAA
*
7730 CCCTAGA
1 CCCTAAA
*
7737 CCCTAGA
1 CCCTAAA
*
7744 CCCTAGA
1 CCCTAAA
*
7751 CCCTAGA
1 CCCTAAA
*
7758 CCCTAGA
1 CCCTAAA
*
7765 CCCTAGA
1 CCCTAAA
*
7772 CCCTAGA
1 CCCTAAA
*
7779 CCCTAGA
1 CCCTAAA
*
7786 CCCTAGA
1 CCCTAAA
*
7793 -CCTAGA
1 CCCTAAA
*
7799 CCCTAGA
1 CCCTAAA
*
7806 CCCTAGA
1 CCCTAAA
*
7813 CCCTAGA
1 CCCTAAA
*
7820 CCCTAGA
1 CCCTAAA
*
7827 CCCTAGA
1 CCCTAAA
*
7834 CCCTAGA
1 CCCTAAA
*
7841 CCCTAGA
1 CCCTAAA
*
7848 CCCTAGA
1 CCCTAAA
*
7855 CCCTAGA
1 CCCTAAA
*
7862 CCCTAGA
1 CCCTAAA
*
7869 CCCTAGA
1 CCCTAAA
*
7876 CCCTAGA
1 CCCTAAA
*
7883 CCCTAGA
1 CCCTAAA
*
7890 CCCTAGA
1 CCCTAAA
*
7897 CCCTAGA
1 CCCTAAA
7904 CCCT--A
1 CCCTAAA
*
7909 CCCTAGA
1 CCCTAAA
*
7916 CCCTAGA
1 CCCTAAA
*
7923 -CCTAGA
1 CCCTAAA
7929 CCCT-AA
1 CCCTAAA
*
7935 CCCTAGA
1 CCCTAAA
*
7942 -CCTAGA
1 CCCTAAA
*
7948 CCCTAGA
1 CCCTAAA
*
7955 CCCTAGA
1 CCCTAAA
*
7962 CCCTAGA
1 CCCTAAA
*
7969 CCCTAGA
1 CCCTAAA
*
7976 CCCTAGA
1 CCCTAAA
*
7983 CCCTAGA
1 CCCTAAA
*
7990 CCCTAGA
1 CCCTAAA
*
7997 CCCTAGA
1 CCCTAAA
8004 CCCT-AA
1 CCCTAAA
*
8010 CCCTAGA
1 CCCTAAA
*
8017 CCCTAGA
1 CCCTAAA
*
8024 CCCTAGA
1 CCCTAAA
*
8031 CCCTAGA
1 CCCTAAA
*
8038 CCCTAGA
1 CCCTAAA
*
8045 CCCTAGA
1 CCCTAAA
*
8052 -CCTAGA
1 CCCTAAA
*
8058 CCCTAGA
1 CCCTAAA
*
8065 CCCTAGA
1 CCCTAAA
*
8072 CCCTAGA
1 CCCTAAA
*
8079 CCCTAGA
1 CCCTAAA
*
8086 CCCTAGA
1 CCCTAAA
*
8093 CCCTAGA
1 CCCTAAA
*
8100 CCCTAGA
1 CCCTAAA
*
8107 CCCTAGA
1 CCCTAAA
*
8114 CCCTAGA
1 CCCTAAA
*
8121 CCCTAGA
1 CCCTAAA
*
8128 CCCTAGA
1 CCCTAAA
*
8135 CCCTAGA
1 CCCTAAA
*
8142 -CCTAGA
1 CCCTAAA
*
8148 CCCTAGA
1 CCCTAAA
*
8155 CCCTAGA
1 CCCTAAA
*
8162 CCCTAGA
1 CCCTAAA
*
8169 CCCTAGA
1 CCCTAAA
*
8176 CCCTAGA
1 CCCTAAA
*
8183 -CCTAGA
1 CCCTAAA
*
8189 CCCTAGA
1 CCCTAAA
*
8196 CCCTAGA
1 CCCTAAA
*
8203 CCCTAGA
1 CCCTAAA
*
8210 CCCTAGA
1 CCCTAAA
*
8217 CCCTAGA
1 CCCTAAA
*
8224 CCCTAGA
1 CCCTAAA
*
8231 CCCTAGA
1 CCCTAAA
*
8238 CCCTAGA
1 CCCTAAA
*
8245 CCCTAGA
1 CCCTAAA
*
8252 CCCTAGA
1 CCCTAAA
*
8259 CCCTAGA
1 CCCTAAA
*
8266 CCCTAGA
1 CCCTAAA
*
8273 CCCTAGA
1 CCCTAAA
*
8280 CCCTAGA
1 CCCTAAA
*
8287 CCCTAGA
1 CCCTAAA
*
8294 CCCTAGA
1 CCCTAAA
*
8301 CCCTAGA
1 CCCTAAA
*
8308 CCCTAGA
1 CCCTAAA
*
8315 -CCTAGA
1 CCCTAAA
*
8321 CCCTAGA
1 CCCTAAA
8328 CCCT-AA
1 CCCTAAA
*
8334 CCCTAGA
1 CCCTAAA
*
8341 CCCTAGA
1 CCCTAAA
*
8348 CCCTAGA
1 CCCTAAA
*
8355 CCCTAGA
1 CCCTAAA
*
8362 -CCTAGA
1 CCCTAAA
8368 CCCT--A
1 CCCTAAA
*
8373 CCCTAGA
1 CCCTAAA
*
8380 CCCTAGA
1 CCCTAAA
*
8387 CCCTAGA
1 CCCTAAA
*
8394 CCCTAGA
1 CCCTAAA
*
8401 CCCTAGA
1 CCCTAAA
*
8408 -CCTAGA
1 CCCTAAA
*
8414 CCCTAGA
1 CCCTAAA
*
8421 CCCTAGA
1 CCCTAAA
*
8428 CCCTAGA
1 CCCTAAA
*
8435 CCCTAGA
1 CCCTAAA
*
8442 CCCTAGA
1 CCCTAAA
*
8449 CCCTAGA
1 CCCTAAA
*
8456 CCCTAGA
1 CCCTAAA
*
8463 -CCTAGA
1 CCCTAAA
*
8469 CCCTAGA
1 CCCTAAA
*
8476 CCCTAGA
1 CCCTAAA
*
8483 CCCTAGA
1 CCCTAAA
*
8490 CCCTAGA
1 CCCTAAA
*
8497 CCCTAGA
1 CCCTAAA
*
8504 CCCTAGA
1 CCCTAAA
*
8511 CCCTAGA
1 CCCTAAA
*
8518 CCCTAGA
1 CCCTAAA
*
8525 CCCTAGA
1 CCCTAAA
*
8532 CCCTAGA
1 CCCTAAA
*
8539 CCCTAGA
1 CCCTAAA
*
8546 CCCTAGA
1 CCCTAAA
*
8553 CCCTAGA
1 CCCTAAA
*
8560 -CCTAGA
1 CCCTAAA
*
8566 CCCTAGA
1 CCCTAAA
*
8573 CCCTAGA
1 CCCTAAA
*
8580 CCCTAGA
1 CCCTAAA
*
8587 CCCTAGA
1 CCCTAAA
*
8594 CCCTAGA
1 CCCTAAA
*
8601 CCCTAGA
1 CCCTAAA
*
8608 CCCTAGA
1 CCCTAAA
*
8615 CCCTAGA
1 CCCTAAA
*
8622 CCCTAGA
1 CCCTAAA
*
8629 CCCTAGA
1 CCCTAAA
*
8636 CCCTAGA
1 CCCTAAA
*
8643 CCCTAGA
1 CCCTAAA
*
8650 -CCTAGA
1 CCCTAAA
*
8656 CCCTAGA
1 CCCTAAA
*
8663 CCCTAGA
1 CCCTAAA
*
8670 CCCTAGA
1 CCCTAAA
*
8677 CCCTAGA
1 CCCTAAA
*
8684 CCCTAGA
1 CCCTAAA
*
8691 CCCTAGA
1 CCCTAAA
*
8698 CCCTAGA
1 CCCTAAA
*
8705 CCCTAGA
1 CCCTAAA
*
8712 CCCTAGA
1 CCCTAAA
*
8719 CCCTAGA
1 CCCTAAA
*
8726 CCCTAGA
1 CCCTAAA
*
8733 CCCTAGA
1 CCCTAAA
*
8740 CCCTAGA
1 CCCTAAA
*
8747 CCCTAGA
1 CCCTAAA
*
8754 CCCTAGA
1 CCCTAAA
*
8761 CCCTAGA
1 CCCTAAA
*
8768 CCCTAGA
1 CCCTAAA
*
8775 CCCTAGA
1 CCCTAAA
*
8782 CCCTAGA
1 CCCTAAA
*
8789 CCCTAGA
1 CCCTAAA
*
8796 CCCTAGA
1 CCCTAAA
*
8803 CCCTAGA
1 CCCTAAA
*
8810 CCCTAGA
1 CCCTAAA
*
8817 CCCTAGA
1 CCCTAAA
*
8824 -CCTAGA
1 CCCTAAA
*
8830 CCCTAGA
1 CCCTAAA
*
8837 CCCTAGA
1 CCCTAAA
*
8844 CCCTAGA
1 CCCTAAA
*
8851 CCCTAGA
1 CCCTAAA
*
8858 -CCTAGA
1 CCCTAAA
*
8864 CCCTAGA
1 CCCTAAA
8871 CCCT--A
1 CCCTAAA
* *
8876 GCCTAGA
1 CCCTAAA
*
8883 CCCTAGA
1 CCCTAAA
*
8890 CCCTAGA
1 CCCTAAA
*
8897 CCCTAGA
1 CCCTAAA
*
8904 CCCTAGA
1 CCCTAAA
*
8911 CCCTAGA
1 CCCTAAA
*
8918 CCCTAGA
1 CCCTAAA
*
8925 CCCTAGA
1 CCCTAAA
*
8932 CCCTAGA
1 CCCTAAA
*
8939 CCCTAGA
1 CCCTAAA
*
8946 CCCTAGA
1 CCCTAAA
*
8953 CCCTAGA
1 CCCTAAA
*
8960 CCCTAGA
1 CCCTAAA
*
8967 -CCTAGA
1 CCCTAAA
*
8973 CCCTAGA
1 CCCTAAA
*
8980 CCCTAGA
1 CCCTAAA
*
8987 CCCTAGA
1 CCCTAAA
*
8994 CCCTAGA
1 CCCTAAA
*
9001 CCCTAGA
1 CCCTAAA
*
9008 CCCTAGA
1 CCCTAAA
*
9015 CCCTAGA
1 CCCTAAA
*
9022 CCCTAGA
1 CCCTAAA
*
9029 -CCTAGA
1 CCCTAAA
*
9035 CCCTAGA
1 CCCTAAA
*
9042 CCCTAGA
1 CCCTAAA
*
9049 -CCTAGA
1 CCCTAAA
*
9055 CCCTAGA
1 CCCTAAA
*
9062 -CCTAGA
1 CCCTAAA
*
9068 CCCTAGA
1 CCCTAAA
*
9075 CCCTAGA
1 CCCTAAA
*
9082 -CCTAGA
1 CCCTAAA
*
9088 CCCTAGA
1 CCCTAAA
*
9095 CCCTAGA
1 CCCTAAA
*
9102 CCCTAGA
1 CCCTAAA
*
9109 CCCTAGA
1 CCCTAAA
*
9116 CCCTAGA
1 CCCTAAA
*
9123 -CCTAGA
1 CCCTAAA
*
9129 CCCTAGA
1 CCCTAAA
*
9136 CCCTAGA
1 CCCTAAA
*
9143 CCCTAGA
1 CCCTAAA
*
9150 CCCTAGA
1 CCCTAAA
*
9157 -CCTAGA
1 CCCTAAA
*
9163 -CCTAGA
1 CCCTAAA
*
9169 CCCTAGA
1 CCCTAAA
*
9176 CCCTAGA
1 CCCTAAA
*
9183 CCCTAGA
1 CCCTAAA
*
9190 CCCTAGA
1 CCCTAAA
*
9197 CCCTAGA
1 CCCTAAA
*
9204 CCCTAGA
1 CCCTAAA
*
9211 CCCTAGA
1 CCCTAAA
*
9218 CCCTAGA
1 CCCTAAA
*
9225 CCCTAGA
1 CCCTAAA
*
9232 CCCTAGA
1 CCCTAAA
*
9239 CCCTAGA
1 CCCTAAA
*
9246 CCCTAGA
1 CCCTAAA
*
9253 CCCTAGA
1 CCCTAAA
*
9260 CCCTAGA
1 CCCTAAA
*
9267 -CCTAGA
1 CCCTAAA
*
9273 CCCTAGA
1 CCCTAAA
*
9280 CCCTAGA
1 CCCTAAA
*
9287 CCCTAGA
1 CCCTAAA
*
9294 CCCTAGA
1 CCCTAAA
*
9301 CCCTAGA
1 CCCTAAA
*
9308 CCCTAGA
1 CCCTAAA
*
9315 -CCTAGA
1 CCCTAAA
*
9321 CCCTAGA
1 CCCTAAA
*
9328 CCCTAGA
1 CCCTAAA
*
9335 CCCTAGA
1 CCCTAAA
*
9342 CCCTAGA
1 CCCTAAA
*
9349 CCCTAGA
1 CCCTAAA
*
9356 CCCTAGA
1 CCCTAAA
*
9363 CCCTAGA
1 CCCTAAA
*
9370 CCCTAGA
1 CCCTAAA
*
9377 CCCTAGA
1 CCCTAAA
*
9384 CCCTAGA
1 CCCTAAA
*
9391 CCCTAGA
1 CCCTAAA
*
9398 -CCTAGA
1 CCCTAAA
*
9404 CCCTAGA
1 CCCTAAA
*
9411 CCCTAGA
1 CCCTAAA
*
9418 CCCTAGA
1 CCCTAAA
*
9425 CCCTAGA
1 CCCTAAA
*
9432 CCCTAGA
1 CCCTAAA
*
9439 CCCTAGA
1 CCCTAAA
*
9446 CCCTAGA
1 CCCTAAA
*
9453 CCCTAGA
1 CCCTAAA
*
9460 CCCTAGA
1 CCCTAAA
*
9467 CCCTAGA
1 CCCTAAA
*
9474 CCCTAGA
1 CCCTAAA
*
9481 CCCTAGA
1 CCCTAAA
*
9488 CCCTAGA
1 CCCTAAA
*
9495 CCCTAGA
1 CCCTAAA
*
9502 CCCTAGA
1 CCCTAAA
*
9509 CCCTAGA
1 CCCTAAA
*
9516 CCCTAGA
1 CCCTAAA
*
9523 CCCTAGA
1 CCCTAAA
*
9530 CCCTAGA
1 CCCTAAA
*
9537 CCCTAGA
1 CCCTAAA
*
9544 CCCTAGA
1 CCCTAAA
*
9551 CCCTAGA
1 CCCTAAA
*
9558 CCCTAGA
1 CCCTAAA
*
9565 CCCTAGA
1 CCCTAAA
*
9572 CCCTAGA
1 CCCTAAA
*
9579 -CCTAGA
1 CCCTAAA
*
9585 CCCTAGA
1 CCCTAAA
*
9592 CCCTAGA
1 CCCTAAA
*
9599 CCCTAGA
1 CCCTAAA
*
9606 CCCTAGA
1 CCCTAAA
*
9613 CCCTAGA
1 CCCTAAA
*
9620 CCCTAGA
1 CCCTAAA
*
9627 CCCTAGA
1 CCCTAAA
*
9634 CCCTAGA
1 CCCTAAA
*
9641 CCCTAGA
1 CCCTAAA
*
9648 CCCTAGA
1 CCCTAAA
*
9655 CCCTAGA
1 CCCTAAA
*
9662 CCCTAGA
1 CCCTAAA
*
9669 CCCTAGA
1 CCCTAAA
*
9676 CCCTAGA
1 CCCTAAA
*
9683 CCCTAGA
1 CCCTAAA
*
9690 CCCTAGA
1 CCCTAAA
*
9697 CCCTAGA
1 CCCTAAA
*
9704 CCCTAGA
1 CCCTAAA
9711 CCCT--A
1 CCCTAAA
*
9716 CCCTAGA
1 CCCTAAA
*
9723 CCCTAGA
1 CCCTAAA
*
9730 CCCTAGA
1 CCCTAAA
*
9737 CCCTAGA
1 CCCTAAA
*
9744 CCCTAGA
1 CCCTAAA
*
9751 CCCTAGA
1 CCCTAAA
*
9758 CCCTAGA
1 CCCTAAA
*
9765 CCCTAGA
1 CCCTAAA
*
9772 CCCTAGA
1 CCCTAAA
*
9779 CCCTAGA
1 CCCTAAA
*
9786 CCCTAGA
1 CCCTAAA
*
9793 CCCTAGA
1 CCCTAAA
*
9800 CCCTAGA
1 CCCTAAA
*
9807 -CCTAGA
1 CCCTAAA
*
9813 CCCTAGA
1 CCCTAAA
*
9820 CCCTAGA
1 CCCTAAA
*
9827 CCCTAGA
1 CCCTAAA
*
9834 CCCTAGA
1 CCCTAAA
*
9841 CCCTAGA
1 CCCTAAA
*
9848 CCCTAGA
1 CCCTAAA
*
9855 CCCTAGA
1 CCCTAAA
*
9862 CCCTAGA
1 CCCTAAA
*
9869 CCCTAGA
1 CCCTAAA
*
9876 CCCTAGA
1 CCCTAAA
*
9883 CCCTAGA
1 CCCTAAA
*
9890 CCCTAGA
1 CCCTAAA
*
9897 -CCTAGA
1 CCCTAAA
*
9903 -CCTAGA
1 CCCTAAA
*
9909 CCCTAGA
1 CCCTAAA
*
9916 CCCTAGA
1 CCCTAAA
*
9923 CCCTAGA
1 CCCTAAA
*
9930 CCCTAGA
1 CCCTAAA
*
9937 CCCTAGA
1 CCCTAAA
*
9944 CCCTAGA
1 CCCTAAA
*
9951 CCCTAGA
1 CCCTAAA
*
9958 CCCTAGA
1 CCCTAAA
*
9965 CCCTAGA
1 CCCTAAA
*
9972 -CCTAGA
1 CCCTAAA
*
9978 CCCTAGA
1 CCCTAAA
*
9985 CCCTAGA
1 CCCTAAA
*
9992 CCCTAGA
1 CCCTAAA
*
9999 CCCTAGA
1 CCCTAAA
*
10006 CCCTAGA
1 CCCTAAA
*
10013 CCCTAGA
1 CCCTAAA
*
10020 CCCTAGA
1 CCCTAAA
*
10027 CCCTAGA
1 CCCTAAA
*
10034 -CCTAGA
1 CCCTAAA
*
10040 CCCTAGA
1 CCCTAAA
*
10047 CCCTAGA
1 CCCTAAA
*
10054 CCCTAGA
1 CCCTAAA
*
10061 -CCTAGA
1 CCCTAAA
*
10067 CCCTAGA
1 CCCTAAA
*
10074 CCCTAGA
1 CCCTAAA
*
10081 CCCTAGA
1 CCCTAAA
*
10088 CCCTAGA
1 CCCTAAA
*
10095 CCCTAGA
1 CCCTAAA
*
10102 CCCTAGA
1 CCCTAAA
*
10109 CCCTAGA
1 CCCTAAA
*
10116 CCCTAGA
1 CCCTAAA
*
10123 CCCTAGA
1 CCCTAAA
*
10130 CCCTAGA
1 CCCTAAA
*
10137 CCCTAGA
1 CCCTAAA
*
10144 CCCTAGA
1 CCCTAAA
*
10151 CCCTAGA
1 CCCTAAA
*
10158 CCCTAGA
1 CCCTAAA
*
10165 CCCTAGA
1 CCCTAAA
*
10172 CCCTAGA
1 CCCTAAA
*
10179 CCCTAGA
1 CCCTAAA
*
10186 CCCTAGA
1 CCCTAAA
*
10193 CCCTAGA
1 CCCTAAA
*
10200 CCCTAGA
1 CCCTAAA
*
10207 CCCTAGA
1 CCCTAAA
*
10214 CCCTAGA
1 CCCTAAA
*
10221 CCCTAGA
1 CCCTAAA
*
10228 CCCTAGA
1 CCCTAAA
*
10235 CCCTAGA
1 CCCTAAA
*
10242 -CCTAGA
1 CCCTAAA
*
10248 CCCTAGA
1 CCCTAAA
*
10255 -CCTAGA
1 CCCTAAA
*
10261 CCCTAGA
1 CCCTAAA
*
10268 CCCTAGA
1 CCCTAAA
10275 CCCTACTAGA
1 CCCTA--A-A
*
10285 CCCTAGA
1 CCCTAAA
*
10292 CCCTAGA
1 CCCTAAA
*
10299 CCCTAGA
1 CCCTAAA
*
10306 CCCTAGA
1 CCCTAAA
*
10313 CCCTAGA
1 CCCTAAA
10320 CCCT-AA
1 CCCTAAA
*
10326 CCCT-GA
1 CCCTAAA
*
10332 CCCTAGA
1 CCCTAAA
*
10339 CCCTAGA
1 CCCTAAA
*
10346 CCCTAGA
1 CCCTAAA
*
10353 --CTAGA
1 CCCTAAA
*
10358 -CCTAGA
1 CCCTAAA
*
10364 CCCTAGA
1 CCCTAAA
*
10371 CCCTAGA
1 CCCTAAA
10378 CCCT-AA
1 CCCTAAA
10384 CCC--AA
1 CCCTAAA
10389 CCCTAAACCA
1 CCCT-AA--A
10399 CCCT-AA
1 CCCTAAA
10405 CCCT-AA
1 CCCTAAA
10411 -CCT-AA
1 CCCTAAA
10416 CCCT-AA
1 CCCTAAA
10422 CCCT-AA
1 CCCTAAA
10428 -CCTAAA
1 CCCTAAA
10434 CCCTAAA
1 CCCTAAA
10441 CCCT-AA
1 CCCTAAA
10447 CCCTAAA
1 CCCTAAA
10454 CCCT-AA
1 CCCTAAA
10460 CCCTAAA
1 CCCTAAA
10467 -CCTAAA
1 CCCTAAA
10473 CCCTAAA
1 CCCTAAA
10480 CCCTAAA
1 CCCTAAA
10487 -CCT-AA
1 CCCTAAA
10492 -CCTAAA
1 CCCTAAA
10498 CCCTAAA
1 CCCTAAA
10505 CCCTAAA
1 CCCTAAA
10512 CCCTAAA
1 CCCTAAA
10519 CCCTAAA
1 CCCTAAA
10526 CCCTAAA
1 CCCTAAA
10533 CCCTAAA
1 CCCTAAA
10540 CCCTAAA
1 CCCTAAA
10547 CCCTAAA
1 CCCTAAA
10554 CCCTAAA
1 CCCTAAA
10561 CCCTAAA
1 CCCTAAA
10568 CCCTAAA
1 CCCTAAA
10575 CCCTAAA
1 CCCTAAA
10582 CCCTAAA
1 CCCTAAA
10589 CCCTAAA
1 CCCTAAA
10596 CCCTAAA
1 CCCTAAA
10603 -CCT-AA
1 CCCTAAA
10608 CCCTAAA
1 CCCTAAA
10615 CCCTAAA
1 CCCTAAA
10622 CCCTAAA
1 CCCTAAA
10629 CCCTAAA
1 CCCTAAA
10636 CCCTAAA
1 CCCTAAA
10643 CCCTAAA
1 CCCTAAA
10650 CCCTAAA
1 CCCTAAA
10657 CCCT-AA
1 CCCTAAA
10663 CCCTAAA
1 CCCTAAA
*
10670 CCCTAGA
1 CCCTAAA
10677 CCCTAAA
1 CCCTAAA
10684 CCCTAAA
1 CCCTAAA
10691 CCCTAAA
1 CCCTAAA
10698 CCCTAAA
1 CCCTAAA
10705 CCCTAAA
1 CCCTAAA
10712 CCCTAAA
1 CCCTAAA
10719 CCCTAAA
1 CCCTAAA
10726 CCCTAAA
1 CCCTAAA
10733 CCCTAAA
1 CCCTAAA
10740 CCCTAAA
1 CCCTAAA
10747 CCCTAAA
1 CCCTAAA
10754 CCCTAAA
1 CCCTAAA
10761 CCCTAAA
1 CCCTAAA
10768 CCCTAAA
1 CCCTAAA
10775 CCCTAAA
1 CCCTAAA
10782 CCCTAAA
1 CCCTAAA
10789 CCCTAAA
1 CCCTAAA
10796 CCCTAAA
1 CCCTAAA
10803 -CCTAAA
1 CCCTAAA
10809 -CCTAAA
1 CCCTAAA
10815 CCCTAAA
1 CCCTAAA
10822 CCCTAAA
1 CCCTAAA
10829 CCCTAAA
1 CCCTAAA
10836 CCCTAAA
1 CCCTAAA
10843 CCCTAAA
1 CCCTAAA
10850 CCCTAAA
1 CCCTAAA
10857 CCCTAAA
1 CCCTAAA
10864 CCCTAAA
1 CCCTAAA
10871 -CCT-AA
1 CCCTAAA
10876 CCCTAAA
1 CCCTAAA
10883 CCCT-AA
1 CCCTAAA
10889 CCCTAAA
1 CCCTAAA
10896 CCCTAAA
1 CCCTAAA
10903 CCCTAAA
1 CCCTAAA
10910 CCCTAAA
1 CCCTAAA
10917 CCCTAAA
1 CCCTAAA
10924 CCCT-AA
1 CCCTAAA
10930 CCCTAAA
1 CCCTAAA
10937 CCCT-AA
1 CCCTAAA
10943 CCCTAAA
1 CCCTAAA
10950 CCCTAAA
1 CCCTAAA
10957 CCCTAAA
1 CCCTAAA
10964 CCCTAAA
1 CCCTAAA
10971 CCCTAAA
1 CCCTAAA
10978 -CCTAAA
1 CCCTAAA
10984 CCCTAAA
1 CCCTAAA
10991 CCCTAAA
1 CCCTAAA
10998 CCCT-AA
1 CCCTAAA
11004 CCCTAAA
1 CCCTAAA
11011 -CCTAAA
1 CCCTAAA
11017 -CCTAAA
1 CCCTAAA
11023 CCCTAAA
1 CCCTAAA
11030 CCCT-AA
1 CCCTAAA
11036 CCCTAAA
1 CCCTAAA
11043 CCCTAAA
1 CCCTAAA
11050 CCCTAAA
1 CCCTAAA
11057 CCCTAAA
1 CCCTAAA
11064 CCCTAAA
1 CCCTAAA
11071 CCCTAAA
1 CCCTAAA
11078 CCCTAAA
1 CCCTAAA
11085 CCCTAAA
1 CCCTAAA
11092 -CCTAAA
1 CCCTAAA
11098 CCCTAAA
1 CCCTAAA
11105 CCCTAAA
1 CCCTAAA
11112 CCCTAAA
1 CCCTAAA
11119 CCCTAAA
1 CCCTAAA
11126 CCCTAAA
1 CCCTAAA
11133 CCCTAAA
1 CCCTAAA
11140 CCCTAAA
1 CCCTAAA
11147 CCCTAAA
1 CCCTAAA
11154 CCCTAAA
1 CCCTAAA
11161 CCCTAAA
1 CCCTAAA
11168 CCCTAAA
1 CCCTAAA
11175 CCCTAAA
1 CCCTAAA
11182 CCCTAAA
1 CCCTAAA
11189 CCCTAAA
1 CCCTAAA
11196 CCCTAAA
1 CCCTAAA
11203 CCCTAAA
1 CCCTAAA
11210 CCCTAAA
1 CCCTAAA
11217 CCCTAAA
1 CCCTAAA
11224 CCCTAAA
1 CCCTAAA
11231 CCCTAAA
1 CCCTAAA
11238 CCCTAAA
1 CCCTAAA
11245 CCCTAAA
1 CCCTAAA
11252 CCCTAAA
1 CCCTAAA
11259 CCCTAAA
1 CCCTAAA
11266 CCCTAAA
1 CCCTAAA
11273 CCCTAAA
1 CCCTAAA
11280 CCCTAAA
1 CCCTAAA
11287 -CCTAAA
1 CCCTAAA
11293 CCCTAAA
1 CCCTAAA
11300 CCCTAAA
1 CCCTAAA
11307 CCCTAAA
1 CCCTAAA
11314 CCCTAAA
1 CCCTAAA
11321 CCCTAAA
1 CCCTAAA
11328 CCCTAAA
1 CCCTAAA
11335 CCCT-AA
1 CCCTAAA
11341 -CCTAAA
1 CCCTAAA
11347 CCCTAAA
1 CCCTAAA
11354 CCCTAAA
1 CCCTAAA
11361 CCCTAAA
1 CCCTAAA
11368 CCCTAAA
1 CCCTAAA
11375 CCCTAAA
1 CCCTAAA
11382 -CCTAAA
1 CCCTAAA
*
11388 CCCGAAA
1 CCCTAAA
11395 -CCTAAA
1 CCCTAAA
11401 CCCTAAA
1 CCCTAAA
11408 CCCTAAA
1 CCCTAAA
11415 CCCTAAA
1 CCCTAAA
11422 CCCTAAA
1 CCCTAAA
11429 CCCTAAA
1 CCCTAAA
11436 CCCTAAA
1 CCCTAAA
11443 CCCTAAA
1 CCCTAAA
11450 CCCT-AA
1 CCCTAAA
**
11456 CCCCGAA
1 CCCTAAA
11463 CCCTAAA
1 CCCTAAA
11470 CCCT-AA
1 CCCTAAA
11476 CCCTAAA
1 CCCTAAA
11483 CCC
1 CCC
11486 CGAACCCCGA
Statistics
Matches: 10812, Mismatches: 173, Indels: 986
0.90 0.01 0.08
Matches are distributed among these distances:
4 24 0.00
5 270 0.02
6 2038 0.19
7 8159 0.75
8 210 0.02
9 69 0.01
10 42 0.00
ACGTcount: A:0.37, C:0.43, G:0.05, T:0.14
Consensus pattern (7 bp):
CCCTAAA
Found at i:172 original size:15 final size:16
Alignment explanation
Indices: 85--175 Score: 67
Period size: 20 Copynumber: 5.0 Consensus size: 16
75 AAACCCTAAA
85 CCCTAAACCCTAAACCC
1 CCCT-AACCCTAAACCC
102 TAACCCTAACCCTAAACCC
1 ---CCCTAACCCTAAACCC
121 TAAACCCTAACCCTAAACCC
1 ----CCCTAACCCTAAACCC
141 TAAACCCTAACCCTAAACCC
1 ----CCCTAACCCTAAACCC
161 CCCTAA-CCTAAACCC
1 CCCTAACCCTAAACCC
176 TAAACCCTAA
Statistics
Matches: 69, Mismatches: 1, Indels: 7
0.90 0.01 0.09
Matches are distributed among these distances:
15 9 0.13
16 6 0.09
19 12 0.17
20 42 0.61
ACGTcount: A:0.37, C:0.48, G:0.00, T:0.14
Consensus pattern (16 bp):
CCCTAACCCTAAACCC
Found at i:6913 original size:9 final size:9
Alignment explanation
Indices: 6899--6926 Score: 56
Period size: 9 Copynumber: 3.1 Consensus size: 9
6889 CCTAGACCCT
6899 AGACCCTAG
1 AGACCCTAG
6908 AGACCCTAG
1 AGACCCTAG
6917 AGACCCTAG
1 AGACCCTAG
6926 A
1 A
6927 CCCTAGACCC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 19 1.00
ACGTcount: A:0.36, C:0.32, G:0.21, T:0.11
Consensus pattern (9 bp):
AGACCCTAG
Found at i:11491 original size:7 final size:7
Alignment explanation
Indices: 11454--13769 Score: 3677
Period size: 7 Copynumber: 343.3 Consensus size: 7
11444 CCTAAACCCT
11454 AACCCCG
1 AACCCCG
*
11461 AA-CCCT
1 AACCCCG
* *
11467 AAACCCT
1 AACCCCG
**
11474 AACCCTA
1 AACCCCG
11481 AACCCCG
1 AACCCCG
11488 AACCCCG
1 AACCCCG
11495 AACCCCG
1 AACCCCG
11502 AACCCCG
1 AACCCCG
11509 AACCCCG
1 AACCCCG
11516 AACCCCG
1 AACCCCG
*
11523 AACCCCT
1 AACCCCG
11530 AA-CCCG
1 AACCCCG
11536 AA-CCCG
1 AACCCCG
*
11542 AAACCCG
1 AACCCCG
11549 AACCCCG
1 AACCCCG
11556 AACCCCG
1 AACCCCG
11563 AAACCCCG
1 -AACCCCG
11571 AACCCCG
1 AACCCCG
11578 AA-CCCG
1 AACCCCG
11584 AACCCCG
1 AACCCCG
11591 AACCCCG
1 AACCCCG
11598 AA-CCCG
1 AACCCCG
11604 AACCCCG
1 AACCCCG
11611 AACCCCG
1 AACCCCG
11618 AACCCCG
1 AACCCCG
11625 AACCCCG
1 AACCCCG
11632 AACCCCCG
1 AA-CCCCG
11640 AA-CCCG
1 AACCCCG
11646 AACCCCG
1 AACCCCG
11653 AA-CCCG
1 AACCCCG
11659 AACCCCG
1 AACCCCG
11666 AACCCCG
1 AACCCCG
11673 AACCCCG
1 AACCCCG
11680 AACCCCG
1 AACCCCG
11687 AA-CCCG
1 AACCCCG
11693 AACCCCG
1 AACCCCG
11700 AA-CCCG
1 AACCCCG
11706 AACCCCG
1 AACCCCG
11713 AACCCCG
1 AACCCCG
11720 AACCCCG
1 AACCCCG
11727 AACCCCG
1 AACCCCG
11734 AA-CCCG
1 AACCCCG
11740 AACCCCG
1 AACCCCG
11747 AACCCCG
1 AACCCCG
11754 AA-CCCG
1 AACCCCG
11760 -ACCCCG
1 AACCCCG
11766 AACCCCG
1 AACCCCG
11773 AACCCCG
1 AACCCCG
11780 AACCCCG
1 AACCCCG
11787 AACCCCG
1 AACCCCG
11794 AA-CCCG
1 AACCCCG
11800 AA-CCCG
1 AACCCCG
11806 AACCCCG
1 AACCCCG
11813 AACCCCG
1 AACCCCG
11820 AA-CCCG
1 AACCCCG
11826 AACCCCCCG
1 AA--CCCCG
11835 AA-CCCG
1 AACCCCG
11841 AACCCCG
1 AACCCCG
11848 AACCCCG
1 AACCCCG
11855 AACCCCG
1 AACCCCG
11862 AACCCCG
1 AACCCCG
11869 AACCCCG
1 AACCCCG
11876 AACCCCG
1 AACCCCG
11883 AACCCCG
1 AACCCCG
11890 AACCCCG
1 AACCCCG
11897 AACCCCG
1 AACCCCG
11904 AACCCCG
1 AACCCCG
11911 AACCCCG
1 AACCCCG
11918 AA-CCCG
1 AACCCCG
11924 AACCCCG
1 AACCCCG
11931 AACCCCG
1 AACCCCG
11938 AA-CCCG
1 AACCCCG
11944 AA-CCCG
1 AACCCCG
11950 AACCCCG
1 AACCCCG
11957 AACCCCG
1 AACCCCG
11964 AA--CCG
1 AACCCCG
11969 AACCCCG
1 AACCCCG
11976 AA-CCCG
1 AACCCCG
11982 AA-CCCG
1 AACCCCG
11988 AACCCCG
1 AACCCCG
11995 AACCCCG
1 AACCCCG
12002 AACCCCG
1 AACCCCG
12009 AACCCCG
1 AACCCCG
12016 AACCCCG
1 AACCCCG
12023 AACCCCG
1 AACCCCG
12030 AA-CCCG
1 AACCCCG
12036 AA-CCCG
1 AACCCCG
12042 AA-CCCG
1 AACCCCG
12048 AACCCCG
1 AACCCCG
12055 AACCCCG
1 AACCCCG
12062 AA-CCCG
1 AACCCCG
12068 AA-CCCG
1 AACCCCG
12074 AA-CCCG
1 AACCCCG
12080 AA-CCCG
1 AACCCCG
12086 AA-CCCG
1 AACCCCG
12092 AACCCCG
1 AACCCCG
12099 AACCCCG
1 AACCCCG
12106 AACCCCG
1 AACCCCG
12113 AACCCCG
1 AACCCCG
12120 AACCCCG
1 AACCCCG
12127 AACCCCG
1 AACCCCG
12134 AA-CCCG
1 AACCCCG
12140 AACCCCG
1 AACCCCG
12147 AACCCCG
1 AACCCCG
12154 AACCCCG
1 AACCCCG
12161 AA-CCCG
1 AACCCCG
12167 AACCCCG
1 AACCCCG
12174 AACCCCG
1 AACCCCG
12181 AACCCCG
1 AACCCCG
12188 AACCCCG
1 AACCCCG
12195 AA--CCG
1 AACCCCG
*
12200 AACCACG
1 AACCCCG
12207 AACCCCG
1 AACCCCG
12214 AACCCCG
1 AACCCCG
12221 AACCCCG
1 AACCCCG
12228 AACCCCG
1 AACCCCG
12235 AACCCCG
1 AACCCCG
12242 AACCCCG
1 AACCCCG
12249 AACCCCG
1 AACCCCG
12256 AACCCCG
1 AACCCCG
12263 AACCCCG
1 AACCCCG
12270 AACCCCG
1 AACCCCG
12277 AACCCCG
1 AACCCCG
12284 AA-CCCG
1 AACCCCG
12290 AACCCCG
1 AACCCCG
12297 AACCCCG
1 AACCCCG
12304 AACCCCG
1 AACCCCG
12311 AACGAACCCG
1 AAC---CCCG
12321 AACCCCG
1 AACCCCG
12328 AACCCCG
1 AACCCCG
12335 AA-CCCG
1 AACCCCG
12341 AA-CCCG
1 AACCCCG
12347 AACCCCG
1 AACCCCG
12354 AACCCCG
1 AACCCCG
12361 AACCCCG
1 AACCCCG
12368 AACCCCG
1 AACCCCG
12375 AA--CCG
1 AACCCCG
12380 AACCCCG
1 AACCCCG
12387 AACCCCG
1 AACCCCG
12394 AACCCCG
1 AACCCCG
12401 AACCCCG
1 AACCCCG
12408 AACCCCG
1 AACCCCG
12415 AA-CCCG
1 AACCCCG
12421 AACCCCG
1 AACCCCG
12428 AA-CCCG
1 AACCCCG
12434 AACCCCG
1 AACCCCG
12441 AACCCCG
1 AACCCCG
12448 AA-CCCG
1 AACCCCG
12454 AACCCCG
1 AACCCCG
12461 AACCCCG
1 AACCCCG
12468 AACCCCG
1 AACCCCG
12475 AACCCCG
1 AACCCCG
12482 AACCCCG
1 AACCCCG
12489 AACCCCG
1 AACCCCG
12496 AACCCCG
1 AACCCCG
12503 AA-CCCG
1 AACCCCG
12509 AACCCCG
1 AACCCCG
12516 AACCCCG
1 AACCCCG
12523 AACCCCG
1 AACCCCG
12530 AA-CCCG
1 AACCCCG
12536 AA-CCCG
1 AACCCCG
12542 AACCCCG
1 AACCCCG
12549 AACCCCG
1 AACCCCG
12556 AA-CCCG
1 AACCCCG
12562 AACCCCG
1 AACCCCG
12569 AA-CCCG
1 AACCCCG
12575 AACCCCG
1 AACCCCG
12582 AACCCCG
1 AACCCCG
12589 AACCCCG
1 AACCCCG
12596 AA-CCCG
1 AACCCCG
12602 AA-CCCG
1 AACCCCG
12608 AACCCCG
1 AACCCCG
12615 AACCCCG
1 AACCCCG
12622 AACCCCG
1 AACCCCG
12629 AACCCCG
1 AACCCCG
12636 AACCCCG
1 AACCCCG
12643 AA-CCCG
1 AACCCCG
12649 AA-CCCG
1 AACCCCG
12655 AACCCCG
1 AACCCCG
12662 AACCCCG
1 AACCCCG
12669 AACCCCG
1 AACCCCG
12676 AA-CCCG
1 AACCCCG
12682 AA-CCCG
1 AACCCCG
12688 AA-CCCG
1 AACCCCG
12694 AACCCCG
1 AACCCCG
12701 AACCCCG
1 AACCCCG
12708 AA-CCCG
1 AACCCCG
12714 AACCCCG
1 AACCCCG
12721 AACCCCG
1 AACCCCG
12728 AACCCCG
1 AACCCCG
12735 AACCCCG
1 AACCCCG
12742 AACCCCG
1 AACCCCG
12749 AACCCCG
1 AACCCCG
12756 AA-CCCG
1 AACCCCG
12762 AA-CCCG
1 AACCCCG
12768 AA-CCCG
1 AACCCCG
12774 AACCCCG
1 AACCCCG
12781 AACCCCG
1 AACCCCG
12788 AACCCCG
1 AACCCCG
12795 AACCCCG
1 AACCCCG
12802 AA-CCCG
1 AACCCCG
12808 AACCCCG
1 AACCCCG
12815 AACCCCG
1 AACCCCG
12822 AACCCCG
1 AACCCCG
12829 AACCCCG
1 AACCCCG
12836 AACCCCG
1 AACCCCG
12843 AA-CCCG
1 AACCCCG
12849 AACCCCG
1 AACCCCG
12856 AACCCCG
1 AACCCCG
12863 AACCCCG
1 AACCCCG
12870 AACCCCG
1 AACCCCG
12877 AACCCCG
1 AACCCCG
12884 AACCCCG
1 AACCCCG
12891 AACCCCG
1 AACCCCG
12898 AACCCCG
1 AACCCCG
12905 AACCCCG
1 AACCCCG
12912 AACCCCG
1 AACCCCG
12919 AACCCCG
1 AACCCCG
12926 AACCCCG
1 AACCCCG
12933 AACCCCG
1 AACCCCG
12940 AA-CCCG
1 AACCCCG
12946 AACCCCG
1 AACCCCG
12953 AACCCCG
1 AACCCCG
12960 AA--CCG
1 AACCCCG
12965 AACCCCG
1 AACCCCG
12972 AACCCCG
1 AACCCCG
12979 AACCCCG
1 AACCCCG
12986 AACCCCG
1 AACCCCG
12993 AA-CCCG
1 AACCCCG
12999 AACCCCG
1 AACCCCG
13006 AACCCCG
1 AACCCCG
13013 AA-CCCG
1 AACCCCG
13019 AACCCCG
1 AACCCCG
13026 AACCCCG
1 AACCCCG
13033 AACCCCG
1 AACCCCG
13040 AACCCCG
1 AACCCCG
13047 AACCCCG
1 AACCCCG
13054 AA-CCCG
1 AACCCCG
13060 AACCCCG
1 AACCCCG
13067 AACCCCG
1 AACCCCG
13074 AA-CCCG
1 AACCCCG
13080 AACCCCG
1 AACCCCG
13087 AA-CCCG
1 AACCCCG
13093 AACCCCG
1 AACCCCG
13100 AA-CCCG
1 AACCCCG
13106 AACCCCG
1 AACCCCG
13113 AA-CCCG
1 AACCCCG
13119 AACCCCG
1 AACCCCG
13126 AACCCCG
1 AACCCCG
13133 AACCCCG
1 AACCCCG
13140 AA-CCCG
1 AACCCCG
13146 AACCCCG
1 AACCCCG
13153 AACCCCG
1 AACCCCG
13160 AACCCCG
1 AACCCCG
13167 AACCCCG
1 AACCCCG
13174 AACCCCG
1 AACCCCG
13181 AA-CCCG
1 AACCCCG
13187 AA-CCCG
1 AACCCCG
13193 AACCCCG
1 AACCCCG
13200 AACCCCG
1 AACCCCG
13207 AACCCCG
1 AACCCCG
13214 AA-CCCG
1 AACCCCG
13220 AA-CCCG
1 AACCCCG
13226 AA-CCCG
1 AACCCCG
13232 AACCCCG
1 AACCCCG
13239 AA-CCCG
1 AACCCCG
13245 AA-CCCG
1 AACCCCG
13251 AA-CCCG
1 AACCCCG
13257 AACCCCG
1 AACCCCG
13264 AA-CCCG
1 AACCCCG
13270 AACCCCG
1 AACCCCG
13277 AA-CCCG
1 AACCCCG
13283 AACCCCG
1 AACCCCG
13290 AACCCCG
1 AACCCCG
13297 AACCCCG
1 AACCCCG
13304 AACCCCG
1 AACCCCG
13311 AACCCCG
1 AACCCCG
13318 AA-CCCG
1 AACCCCG
13324 AACCCCG
1 AACCCCG
13331 AACCCCG
1 AACCCCG
13338 AACCCCG
1 AACCCCG
13345 AACCCCG
1 AACCCCG
13352 AACCCCG
1 AACCCCG
13359 AACCCCG
1 AACCCCG
13366 AACCCCG
1 AACCCCG
13373 AACCCCG
1 AACCCCG
13380 AACCCCG
1 AACCCCG
13387 AACCCCG
1 AACCCCG
13394 AACCCCG
1 AACCCCG
13401 AACCCCG
1 AACCCCG
13408 AA-CCCG
1 AACCCCG
13414 AACCCCG
1 AACCCCG
13421 AACCCCG
1 AACCCCG
13428 AACCCCG
1 AACCCCG
13435 AACCCCG
1 AACCCCG
13442 AACCCCG
1 AACCCCG
13449 AA-CCCG
1 AACCCCG
13455 AACCCCG
1 AACCCCG
13462 AACCCCG
1 AACCCCG
13469 AACCCCG
1 AACCCCG
13476 AACCCCG
1 AACCCCG
13483 AA-CCCG
1 AACCCCG
13489 AA-CCCG
1 AACCCCG
13495 AACCCCG
1 AACCCCG
13502 AACCCCG
1 AACCCCG
13509 AACCCCG
1 AACCCCG
13516 AA-CCCG
1 AACCCCG
13522 AACCCCG
1 AACCCCG
13529 AACCCCG
1 AACCCCG
13536 AACCCCG
1 AACCCCG
13543 AA-CCCG
1 AACCCCG
13549 AACCCCG
1 AACCCCG
13556 AACCCCG
1 AACCCCG
13563 AACCCCG
1 AACCCCG
13570 AACCCCG
1 AACCCCG
13577 AACCCCG
1 AACCCCG
13584 AACCCCG
1 AACCCCG
13591 AA-CCCG
1 AACCCCG
13597 AA-CCCG
1 AACCCCG
13603 AA-CCCG
1 AACCCCG
13609 AACCCCG
1 AACCCCG
13616 AACCCCG
1 AACCCCG
13623 AACCCCG
1 AACCCCG
13630 AACCCCG
1 AACCCCG
*
13637 AGCCCCG
1 AACCCCG
13644 AACCCCG
1 AACCCCG
*
13651 AGCCCCG
1 AACCCCG
*
13658 -AGCCCG
1 AACCCCG
*
13664 AGCCCCG
1 AACCCCG
*
13671 AGCCCCG
1 AACCCCG
*
13678 AGCCCCG
1 AACCCCG
*
13685 AGCCCCG
1 AACCCCG
*
13692 AGCCCCG
1 AACCCCG
*
13699 AGCCCCG
1 AACCCCG
*
13706 -AGCCCG
1 AACCCCG
*
13712 AGCCCCG
1 AACCCCG
*
13719 AGCCCCG
1 AACCCCG
*
13726 AGCCCCG
1 AACCCCG
*
13733 AGCCCCG
1 AACCCCG
*
13740 AGCCCCG
1 AACCCCG
*
13747 AGCCCCG
1 AACCCCG
*
13754 AGCCCCG
1 AACCCCG
*
13761 AGCCCCG
1 AACCCCG
13768 AA
1 AA
13770 TGGGTCAACA
Statistics
Matches: 2211, Mismatches: 23, Indels: 150
0.93 0.01 0.06
Matches are distributed among these distances:
5 21 0.01
6 506 0.23
7 1657 0.75
8 14 0.01
9 6 0.00
10 7 0.00
ACGTcount: A:0.29, C:0.55, G:0.15, T:0.00
Consensus pattern (7 bp):
AACCCCG
Found at i:14188 original size:20 final size:20
Alignment explanation
Indices: 14139--14179 Score: 64
Period size: 20 Copynumber: 2.0 Consensus size: 20
14129 TCTGAAACTT
**
14139 AAAATCGCAACATGAAAATG
1 AAAATCGCAACACAAAAATG
14159 AAAATCGCAACACAAAAATG
1 AAAATCGCAACACAAAAATG
14179 A
1 A
14180 CTATCGCAAT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
20 19 1.00
ACGTcount: A:0.59, C:0.17, G:0.12, T:0.12
Consensus pattern (20 bp):
AAAATCGCAACACAAAAATG
Found at i:14261 original size:14 final size:14
Alignment explanation
Indices: 14202--14262 Score: 59
Period size: 14 Copynumber: 4.0 Consensus size: 14
14192 GAATTTGACT
*
14202 ATCGCAACGAGATA
1 ATCGCAACGAGAAA
*
14216 ATCGCAACGCGAAATGAAC
1 ATCGCAA--CG--A-GAAA
14235 ATCGCAACGAGAAA
1 ATCGCAACGAGAAA
14249 ATCGCAACGAGAAA
1 ATCGCAACGAGAAA
14263 CTAAAATCAT
Statistics
Matches: 39, Mismatches: 3, Indels: 10
0.75 0.06 0.19
Matches are distributed among these distances:
14 24 0.62
15 1 0.03
16 2 0.05
17 2 0.05
18 1 0.03
19 9 0.23
ACGTcount: A:0.46, C:0.23, G:0.21, T:0.10
Consensus pattern (14 bp):
ATCGCAACGAGAAA
Found at i:14690 original size:22 final size:22
Alignment explanation
Indices: 14652--14732 Score: 69
Period size: 22 Copynumber: 3.8 Consensus size: 22
14642 CTCTAAGAGA
14652 TGGAGATA--GACGGATTTCGC
1 TGGAGATAGGGACGGATTTCGC
* *
14672 TGGAGATAGGGACGAATTTTGC
1 TGGAGATAGGGACGGATTTCGC
* * *
14694 CGGAAATGGGGACGGATTTCG-
1 TGGAGATAGGGACGGATTTCGC
* *
14715 TCAGAGATTGGGACGGAT
1 T-GGAGATAGGGACGGAT
14733 GTCGTTGTAG
Statistics
Matches: 47, Mismatches: 11, Indels: 4
0.76 0.18 0.06
Matches are distributed among these distances:
20 8 0.17
22 39 0.83
ACGTcount: A:0.26, C:0.12, G:0.38, T:0.23
Consensus pattern (22 bp):
TGGAGATAGGGACGGATTTCGC
Found at i:14940 original size:41 final size:41
Alignment explanation
Indices: 14877--14972 Score: 102
Period size: 41 Copynumber: 2.3 Consensus size: 41
14867 GCGCTTTGAA
* * * *
14877 AATCGCATTACGATTTTATATTATCACAACGCGATAGTTAG
1 AATCGCGTTGCGATTATATATTATCACAACGCGATAGTCAG
* * ***
14918 AATCGCGTTGCGATTATGTATTATCGCGTTGCGATAGTCAG
1 AATCGCGTTGCGATTATATATTATCACAACGCGATAGTCAG
*
14959 AATTGCGTTGCGAT
1 AATCGCGTTGCGAT
14973 AGTCAAAATC
Statistics
Matches: 45, Mismatches: 10, Indels: 0
0.82 0.18 0.00
Matches are distributed among these distances:
41 45 1.00
ACGTcount: A:0.27, C:0.17, G:0.22, T:0.34
Consensus pattern (41 bp):
AATCGCGTTGCGATTATATATTATCACAACGCGATAGTCAG
Found at i:14968 original size:20 final size:20
Alignment explanation
Indices: 14907--14992 Score: 93
Period size: 20 Copynumber: 4.2 Consensus size: 20
14897 TTATCACAAC
*
14907 GCGATAGTTAGAATCGCGTT
1 GCGATAGTCAGAATCGCGTT
**
14927 GCGATTATGT-ATTATCGCGTT
1 GCGA-TA-GTCAGAATCGCGTT
*
14948 GCGATAGTCAGAATTGCGTT
1 GCGATAGTCAGAATCGCGTT
* *
14968 GCGATAGTCAAAATCGCATT
1 GCGATAGTCAGAATCGCGTT
14988 GCGAT
1 GCGAT
14993 TTACATATTC
Statistics
Matches: 55, Mismatches: 8, Indels: 6
0.80 0.12 0.09
Matches are distributed among these distances:
19 2 0.04
20 36 0.65
21 15 0.27
22 2 0.04
ACGTcount: A:0.26, C:0.16, G:0.27, T:0.31
Consensus pattern (20 bp):
GCGATAGTCAGAATCGCGTT
Found at i:15123 original size:19 final size:19
Alignment explanation
Indices: 15099--15135 Score: 65
Period size: 19 Copynumber: 1.9 Consensus size: 19
15089 TTCGATAATG
*
15099 GAGATCGCGTTGCGATTTA
1 GAGATCGCATTGCGATTTA
15118 GAGATCGCATTGCGATTT
1 GAGATCGCATTGCGATTT
15136 TGTTGGTCAT
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
19 17 1.00
ACGTcount: A:0.22, C:0.16, G:0.30, T:0.32
Consensus pattern (19 bp):
GAGATCGCATTGCGATTTA
Found at i:20848 original size:11 final size:11
Alignment explanation
Indices: 20832--20862 Score: 62
Period size: 11 Copynumber: 2.8 Consensus size: 11
20822 GTCTTTATGA
20832 TGAAACAAATC
1 TGAAACAAATC
20843 TGAAACAAATC
1 TGAAACAAATC
20854 TGAAACAAA
1 TGAAACAAA
20863 CTCGATAACA
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 20 1.00
ACGTcount: A:0.58, C:0.16, G:0.10, T:0.16
Consensus pattern (11 bp):
TGAAACAAATC
Found at i:24592 original size:108 final size:108
Alignment explanation
Indices: 24472--24683 Score: 370
Period size: 108 Copynumber: 2.0 Consensus size: 108
24462 ATGAGGCCAT
* * *
24472 CAAAAAAGACCATGACAGTATAGATGGAAATGTTCTTATTCCATTTGCTAATCATACCGGAGAAC
1 CAAAAAAGACCATGACAGGATAGATGGAAATGTTATTATTCCATTTGCTAATCATACCGAAGAAC
24537 CCTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGCCCAA
66 CCTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGCCCAA
* *
24580 CAAAAAAGACCATGACAGGATAGATGGAAATGTTATTATTCCATTTGCTAATCATACTGAAGTAC
1 CAAAAAAGACCATGACAGGATAGATGGAAATGTTATTATTCCATTTGCTAATCATACCGAAGAAC
*
24645 CCTCTCAAACTAAGGAGGGGAATGAAGATTTTAGTAGGC
66 CCTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGC
24684 TCAAGAATGT
Statistics
Matches: 98, Mismatches: 6, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
108 98 1.00
ACGTcount: A:0.38, C:0.17, G:0.21, T:0.25
Consensus pattern (108 bp):
CAAAAAAGACCATGACAGGATAGATGGAAATGTTATTATTCCATTTGCTAATCATACCGAAGAAC
CCTCACAAACTAAGGAGGGGAATGAAGATTTTAGTAGGCCCAA
Found at i:26398 original size:20 final size:20
Alignment explanation
Indices: 26373--26417 Score: 81
Period size: 20 Copynumber: 2.2 Consensus size: 20
26363 TTATCTGGAA
*
26373 AAAAATCCGGTCTGGGGTTT
1 AAAAATCCGGTCTGGAGTTT
26393 AAAAATCCGGTCTGGAGTTT
1 AAAAATCCGGTCTGGAGTTT
26413 AAAAA
1 AAAAA
26418 ATTGGATGAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
20 24 1.00
ACGTcount: A:0.36, C:0.13, G:0.24, T:0.27
Consensus pattern (20 bp):
AAAAATCCGGTCTGGAGTTT
Found at i:30216 original size:3 final size:3
Alignment explanation
Indices: 30210--30263 Score: 58
Period size: 3 Copynumber: 18.7 Consensus size: 3
30200 CCGAGAATAA
* * * *
30210 TAT TAT TAT TAT TAT CAT TAT TA- TAC TAC AAT TAT TA- TAT TAT TAT
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
30256 TAT TAT TA
1 TAT TAT TA
30264 AATATTACAA
Statistics
Matches: 44, Mismatches: 5, Indels: 4
0.83 0.09 0.08
Matches are distributed among these distances:
2 4 0.09
3 40 0.91
ACGTcount: A:0.37, C:0.06, G:0.00, T:0.57
Consensus pattern (3 bp):
TAT
Found at i:30315 original size:15 final size:15
Alignment explanation
Indices: 30295--30332 Score: 76
Period size: 15 Copynumber: 2.5 Consensus size: 15
30285 AGTTACAATG
30295 AAGACCCGAAGGCCC
1 AAGACCCGAAGGCCC
30310 AAGACCCGAAGGCCC
1 AAGACCCGAAGGCCC
30325 AAGACCCG
1 AAGACCCG
30333 TGCCAGGCCC
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 23 1.00
ACGTcount: A:0.34, C:0.39, G:0.26, T:0.00
Consensus pattern (15 bp):
AAGACCCGAAGGCCC
Found at i:31952 original size:22 final size:22
Alignment explanation
Indices: 31926--31971 Score: 92
Period size: 22 Copynumber: 2.1 Consensus size: 22
31916 ATAAAATATT
31926 TTCTTAACTGATTAGGAAAGTA
1 TTCTTAACTGATTAGGAAAGTA
31948 TTCTTAACTGATTAGGAAAGTA
1 TTCTTAACTGATTAGGAAAGTA
31970 TT
1 TT
31972 TAAATCATTA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
22 24 1.00
ACGTcount: A:0.35, C:0.09, G:0.17, T:0.39
Consensus pattern (22 bp):
TTCTTAACTGATTAGGAAAGTA
Found at i:39323 original size:198 final size:193
Alignment explanation
Indices: 38972--39366 Score: 722
Period size: 198 Copynumber: 2.0 Consensus size: 193
38962 GATGAATCTT
38972 GTCTTCAATAATAAAATGTTCACGAGGAAACTGATTCCTACTCCCAGACCAAGTTAATATCAACC
1 GTCTTCAATAATAAAATGTTCACGAGGAAACTGATTCCTACTCCCAGACCAAGTTAATATCAACC
39037 TTTGTATTCCTAAGAATGCTAAAAAATTCCTGCTCTTTTCTTGACTTCTTGAACTCCTTGATAGA
66 TTTGTATTCCTAAGAATGCTAAAAAATTCCTGCTCTTTTCTTGACTTCTTGAACTCCTTGATAGA
39102 CTCTACAAGCCTTCTCCTCAAAGCCATCCTCAGACATTAAGTAGCTAAACAGCCTAAAAGGCC
131 CTCTACAAGCCTTCTCCTCAAAGCCATCCTCAGACATTAAGTAGCTAAACAGCCTAAAAGGCC
39165 GTCTTCAATAATAGAAATATGTTCACGAGGAAACTGATTCCTACTCCCAGACCAAGTCTTAATAT
1 GTCTTCAATAAT--AAA-ATGTTCACGAGGAAACTGATTCCTACTCCCAGACCAAG--TTAATAT
39230 CAACCTTTGTATTCCTAAGAATGCTAAAAAATTCCTGCTCTTTTCTTGACCTTCTTGAACTCCTT
61 CAACCTTTGTATTCCTAAGAATGCTAAAAAATTCCTGCTCTTTTCTTGA-CTTCTTGAACTCCTT
39295 GATAGACTCTAC-AGCCTTCTCCTCAAAGCCATCCTCAGACATTAAGTAGCTAAACAGCCTAAAA
125 GATAGACTCTACAAGCCTTCTCCTCAAAGCCATCCTCAGACATTAAGTAGCTAAACAGCCTAAAA
39359 GGCC
190 GGCC
39363 -TCTT
1 GTCTT
39367 ACCCCAATTA
Statistics
Matches: 196, Mismatches: 0, Indels: 8
0.96 0.00 0.04
Matches are distributed among these distances:
193 12 0.06
195 3 0.02
196 38 0.19
197 4 0.02
198 112 0.57
199 27 0.14
ACGTcount: A:0.31, C:0.26, G:0.12, T:0.30
Consensus pattern (193 bp):
GTCTTCAATAATAAAATGTTCACGAGGAAACTGATTCCTACTCCCAGACCAAGTTAATATCAACC
TTTGTATTCCTAAGAATGCTAAAAAATTCCTGCTCTTTTCTTGACTTCTTGAACTCCTTGATAGA
CTCTACAAGCCTTCTCCTCAAAGCCATCCTCAGACATTAAGTAGCTAAACAGCCTAAAAGGCC
Found at i:41571 original size:42 final size:42
Alignment explanation
Indices: 41464--41575 Score: 111
Period size: 42 Copynumber: 2.7 Consensus size: 42
41454 TCTAGAATGT
* * * *
41464 TGGGAG-GGACCTCTTCAACGATGACAGTGGCCTCTTGAACGG
1 TGGGAGAGG-CCTCTTGAACGATGACAGGGGCCTATTGAACGA
* * ** *
41506 TGGGAGGGGACTCTTGAGGGATGATAGGGGCCTATTGAACGA
1 TGGGAGAGGCCTCTTGAACGATGACAGGGGCCTATTGAACGA
41548 TAGGG-GAGGCCTCTTGAACGATGACAGG
1 T-GGGAGAGGCCTCTTGAACGATGACAGG
41576 TGAGTTGGGC
Statistics
Matches: 55, Mismatches: 13, Indels: 4
0.76 0.18 0.06
Matches are distributed among these distances:
42 50 0.91
43 5 0.09
ACGTcount: A:0.23, C:0.18, G:0.38, T:0.21
Consensus pattern (42 bp):
TGGGAGAGGCCTCTTGAACGATGACAGGGGCCTATTGAACGA
Found at i:42083 original size:20 final size:20
Alignment explanation
Indices: 42058--42143 Score: 100
Period size: 20 Copynumber: 4.3 Consensus size: 20
42048 ACTTAAAATT
42058 GCAACGCAAAAATGACTATC
1 GCAACGCAAAAATGACTATC
*
42078 GCAACGCGAAAATGACTATC
1 GCAACGCAAAAATGACTATC
* **
42098 GCAATGCAAATTTGACTATC
1 GCAACGCAAAAATGACTATC
* * **
42118 GCAATGCGAATTTGACTATC
1 GCAACGCAAAAATGACTATC
42138 GCAACG
1 GCAACG
42144 AGAGAATCGC
Statistics
Matches: 59, Mismatches: 7, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
20 59 1.00
ACGTcount: A:0.37, C:0.23, G:0.19, T:0.21
Consensus pattern (20 bp):
GCAACGCAAAAATGACTATC
Found at i:42225 original size:20 final size:20
Alignment explanation
Indices: 42188--42341 Score: 120
Period size: 20 Copynumber: 8.3 Consensus size: 20
42178 GATTCTTTCG
**
42188 TTGCGATAGTCAAATTCGCA
1 TTGCGATAGTCATTTTCGCA
*
42208 TTGCGATAGTCATTTTCGCG
1 TTGCGATAGTCATTTTCGCA
*
42228 TTACGAT--T--TTGTT-G--
1 TTGCGATAGTCATT-TTCGCA
**
42242 TTGCGATTTTCA-TTTCGCA
1 TTGCGATAGTCATTTTCGCA
42261 TTGCGAT--TC----TCGCA
1 TTGCGATAGTCATTTTCGCA
*
42275 TTGCGATAGTCATTTTCGCG
1 TTGCGATAGTCATTTTCGCA
**
42295 TTGCGATAGTCATTTTCGTG
1 TTGCGATAGTCATTTTCGCA
42315 TTGCGATAGTCATTTTCGCA
1 TTGCGATAGTCATTTTCGCA
42335 TTGCGAT
1 TTGCGAT
42342 TGTAAATTAT
Statistics
Matches: 111, Mismatches: 9, Indels: 28
0.75 0.06 0.19
Matches are distributed among these distances:
14 18 0.16
16 8 0.07
17 6 0.05
18 1 0.01
19 7 0.06
20 71 0.64
ACGTcount: A:0.18, C:0.19, G:0.22, T:0.42
Consensus pattern (20 bp):
TTGCGATAGTCATTTTCGCA
Found at i:42262 original size:87 final size:87
Alignment explanation
Indices: 42156--42321 Score: 260
Period size: 87 Copynumber: 1.9 Consensus size: 87
42146 AGAATCGCAA
** *
42156 TGCGATTTTCATTTCGCATTGCGATTCTTTCGTTGCGATAGTCAAATTCGCATTGCGATAGTCAT
1 TGCGATTTTCATTTCGCATTGCGATTCTCGCATTGCGATAGTCAAATTCGCATTGCGATAGTCAT
42221 TTTCGCGTTACGATTTTGTTGT
66 TTTCGCGTTACGATTTTGTTGT
** *
42243 TGCGATTTTCATTTCGCATTGCGATTCTCGCATTGCGATAGTCATTTTCGCGTTGCGATAGTCAT
1 TGCGATTTTCATTTCGCATTGCGATTCTCGCATTGCGATAGTCAAATTCGCATTGCGATAGTCAT
* *
42308 TTTCGTGTTGCGAT
66 TTTCGCGTTACGAT
42322 AGTCATTTTC
Statistics
Matches: 71, Mismatches: 8, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
87 71 1.00
ACGTcount: A:0.16, C:0.19, G:0.22, T:0.43
Consensus pattern (87 bp):
TGCGATTTTCATTTCGCATTGCGATTCTCGCATTGCGATAGTCAAATTCGCATTGCGATAGTCAT
TTTCGCGTTACGATTTTGTTGT
Found at i:44252 original size:19 final size:19
Alignment explanation
Indices: 44225--44292 Score: 73
Period size: 19 Copynumber: 3.5 Consensus size: 19
44215 GCAAAGCAAG
*
44225 AATCACAACGCGAAATGAA
1 AATCGCAACGCGAAATGAA
* *
44244 AATCGCAACGCGAATTTGAC
1 AATCGCAACGCGAA-ATGAA
* *
44264 TATCGCAACGCGAAATAAA
1 AATCGCAACGCGAAATGAA
*
44283 AATTGCAACG
1 AATCGCAACG
44293 ACAGAATCGC
Statistics
Matches: 39, Mismatches: 9, Indels: 2
0.78 0.18 0.04
Matches are distributed among these distances:
19 23 0.59
20 16 0.41
ACGTcount: A:0.44, C:0.22, G:0.18, T:0.16
Consensus pattern (19 bp):
AATCGCAACGCGAAATGAA
Found at i:44270 original size:20 final size:19
Alignment explanation
Indices: 44172--44279 Score: 91
Period size: 20 Copynumber: 5.8 Consensus size: 19
44162 GAAACTTAAA
*
44172 ATCGCAACACGAAAATGACT
1 ATCGCAACGCG-AAATGACT
*
44192 ATCGCAACGCGAATTTGACT
1 ATCGCAACGCGAA-ATGACT
*
44212 ATCGCAAAGC--AA-GA--
1 ATCGCAACGCGAAATGACT
* **
44226 ATCACAACGCGAAATGAAA
1 ATCGCAACGCGAAATGACT
*
44245 ATCGCAACGCGAATTTGACT
1 ATCGCAACGCGAA-ATGACT
44265 ATCGCAACGCGAAAT
1 ATCGCAACGCGAAAT
44280 AAAAATTGCA
Statistics
Matches: 70, Mismatches: 11, Indels: 15
0.73 0.11 0.16
Matches are distributed among these distances:
14 8 0.11
16 4 0.06
17 2 0.03
18 1 0.01
19 15 0.21
20 40 0.57
ACGTcount: A:0.41, C:0.24, G:0.19, T:0.17
Consensus pattern (19 bp):
ATCGCAACGCGAAATGACT
Found at i:44688 original size:22 final size:22
Alignment explanation
Indices: 44628--44693 Score: 96
Period size: 22 Copynumber: 3.0 Consensus size: 22
44618 TGACCGTGAA
* * *
44628 TGATTTCGCCGGAGATAGAGAC
1 TGATTTCGTCGGAGATGGGGAC
*
44650 TGATATCGTCGGAGATGGGGAC
1 TGATTTCGTCGGAGATGGGGAC
44672 TGATTTCGTCGGAGATGGGGAC
1 TGATTTCGTCGGAGATGGGGAC
44694 GGATGTTGCC
Statistics
Matches: 39, Mismatches: 5, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
22 39 1.00
ACGTcount: A:0.23, C:0.15, G:0.38, T:0.24
Consensus pattern (22 bp):
TGATTTCGTCGGAGATGGGGAC
Found at i:44914 original size:20 final size:20
Alignment explanation
Indices: 44891--44963 Score: 119
Period size: 20 Copynumber: 3.6 Consensus size: 20
44881 CGATAGTCAG
*
44891 ATTCGCGTTGCGATTTACGT
1 ATTCGCATTGCGATTTACGT
*
44911 ATTCGCATTGCAATTTACGT
1 ATTCGCATTGCGATTTACGT
44931 ATTCGCATTGCGATTTACGT
1 ATTCGCATTGCGATTTACGT
*
44951 ATTAGCATTGCGA
1 ATTCGCATTGCGA
44964 ATTAGGAAAA
Statistics
Matches: 49, Mismatches: 4, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
20 49 1.00
ACGTcount: A:0.22, C:0.19, G:0.21, T:0.38
Consensus pattern (20 bp):
ATTCGCATTGCGATTTACGT
Found at i:44986 original size:21 final size:21
Alignment explanation
Indices: 44960--45005 Score: 58
Period size: 21 Copynumber: 2.2 Consensus size: 21
44950 TATTAGCATT
*
44960 GCGAA-TTAGGAAAATCTCAAC
1 GCGAATTTA-GAAAATCGCAAC
*
44981 GCGAATTTAGAAAATCGCAAT
1 GCGAATTTAGAAAATCGCAAC
45002 GCGA
1 GCGA
45006 TAGTCAGAAT
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
21 19 0.86
22 3 0.14
ACGTcount: A:0.41, C:0.17, G:0.22, T:0.20
Consensus pattern (21 bp):
GCGAATTTAGAAAATCGCAAC
Found at i:54200 original size:39 final size:39
Alignment explanation
Indices: 54129--54206 Score: 95
Period size: 39 Copynumber: 2.0 Consensus size: 39
54119 CCCGGAATAT
* *
54129 TACCCGGGGACGCATCTGCTACTAAAGGGAAAGTAGCAC
1 TACCCGGGGACGCATCTGCTACCAAAGCGAAAGTAGCAC
* * *
54168 TACCCGGGGACTCA-CTCGTTACCAAAGCGAAAGTTGCAC
1 TACCCGGGGACGCATCT-GCTACCAAAGCGAAAGTAGCAC
54207 CTGCTGCGAA
Statistics
Matches: 33, Mismatches: 5, Indels: 2
0.82 0.12 0.05
Matches are distributed among these distances:
38 2 0.06
39 31 0.94
ACGTcount: A:0.29, C:0.28, G:0.26, T:0.17
Consensus pattern (39 bp):
TACCCGGGGACGCATCTGCTACCAAAGCGAAAGTAGCAC
Found at i:54329 original size:21 final size:21
Alignment explanation
Indices: 54283--54339 Score: 55
Period size: 21 Copynumber: 2.8 Consensus size: 21
54273 ACTTTGATGA
*
54283 AGAAGATAAAGCTAAAAAGAT
1 AGAAGATAAAGATAAAAAGAT
* *
54304 GGAAGA-AAAGATAAAAATATT
1 AGAAGATAAAGATAAAAAGA-T
*
54325 AGAAGATCAA-ATAAA
1 AGAAGATAAAGATAAA
54340 GATGGTCCAG
Statistics
Matches: 29, Mismatches: 5, Indels: 4
0.76 0.13 0.11
Matches are distributed among these distances:
20 11 0.38
21 16 0.55
22 2 0.07
ACGTcount: A:0.63, C:0.04, G:0.18, T:0.16
Consensus pattern (21 bp):
AGAAGATAAAGATAAAAAGAT
Found at i:62366 original size:105 final size:105
Alignment explanation
Indices: 61689--62358 Score: 1080
Period size: 105 Copynumber: 6.4 Consensus size: 105
61679 AGGTTTTACC
*
61689 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGAC-CATAGACAACGCAAGTTCAACTTCAC
1 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTC-CAGACAACGCAAGTTCAACTTCAC
*
61753 GACGAAGGGACCGCTGGTTGTCACCAAACATTTCTCCAA-TT
65 GACGAAGGGACCGCTGGTTGTCAACAAACATTTCT-CAATTT
*
61794 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGAC-CATAGACAACGCAAGTTCAACTTCAC
1 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTC-CAGACAACGCAAGTTCAACTTCAC
*
61858 GACGAAGGGACCGCTGGTTGTCACCAAACATTTCTCCAA-TT
65 GACGAAGGGACCGCTGGTTGTCAACAAACATTTCT-CAATTT
* *
61899 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACCCCAGACGACGCAAGTTCAACTTCACG
1 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTCCAGACAACGCAAGTTCAACTTCACG
* * *
61964 ATGAAGGGACCGCTGGTTGTCACCAAACGTTTCTCAATTT
66 ACGAAGGGACCGCTGGTTGTCAACAAACATTTCTCAATTT
* * *
62004 CAGAGCCAATTTCAACCTCATAACGAAGGATATTGGACTCCAGACAACGCAAGTTCAACTTCACA
1 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTCCAGACAACGCAAGTTCAACTTCACG
62069 ACGAAGGGACCGCTGGTTGTCAACAAACATTTCTCAATTT
66 ACGAAGGGACCGCTGGTTGTCAACAAACATTTCTCAATTT
* *
62109 CAGAGCCAATTTCGACTTCACAACGAAGGATATTGGACTCCAGACAATGCAAGTTCAACTTCACG
1 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTCCAGACAACGCAAGTTCAACTTCACG
* * * *
62174 ACGAAGGGACCGCTGCTTGTCAAC-AACGACTTCCCAATCT
66 ACGAAGGGACCGCTGGTTGTCAACAAAC-ATTTCTCAATTT
62214 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTCCAGACAACGCAAGTTCAACTTCACG
1 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTCCAGACAACGCAAGTTCAACTTCACG
*
62279 ACGAAGGGACCGCCGGTTGTCAACAAACATTTCTCAATTT
66 ACGAAGGGACCGCTGGTTGTCAACAAACATTTCTCAATTT
*
62319 CAGAGCCAATCTCAACTTCACAACGAAGGATATTGGACTC
1 CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTC
62359 GAAACAACAC
Statistics
Matches: 532, Mismatches: 29, Indels: 8
0.93 0.05 0.01
Matches are distributed among these distances:
104 6 0.01
105 522 0.98
106 4 0.01
ACGTcount: A:0.33, C:0.27, G:0.18, T:0.22
Consensus pattern (105 bp):
CAGAGCCAATTTCAACTTCACAACGAAGGATATTGGACTCCAGACAACGCAAGTTCAACTTCACG
ACGAAGGGACCGCTGGTTGTCAACAAACATTTCTCAATTT
Found at i:63939 original size:19 final size:20
Alignment explanation
Indices: 63912--63950 Score: 53
Period size: 19 Copynumber: 2.0 Consensus size: 20
63902 CTTTGTATTA
*
63912 CTATAATTATTTA-ATTTTT
1 CTATAATTATATATATTTTT
*
63931 CTATTATTATATATATTTTT
1 CTATAATTATATATATTTTT
63951 TCCCTCTCTC
Statistics
Matches: 17, Mismatches: 2, Indels: 1
0.85 0.10 0.05
Matches are distributed among these distances:
19 11 0.65
20 6 0.35
ACGTcount: A:0.31, C:0.05, G:0.00, T:0.64
Consensus pattern (20 bp):
CTATAATTATATATATTTTT
Found at i:70593 original size:46 final size:45
Alignment explanation
Indices: 70461--70586 Score: 200
Period size: 46 Copynumber: 2.8 Consensus size: 45
70451 GATAAACTGG
* * *
70461 AAAATAAGCTTACGAGCTTATGGAAT-AATGGCAAGTATATTGGT
1 AAAATAAGCTTACGAGCTTATGGGATAAATGGTAAGTATTTTGGT
70505 AAAATAAGCTTACGAGCTTATGGGATTAAATGGTAAGTATTTTGGT
1 AAAATAAGCTTACGAGCTTATGGGA-TAAATGGTAAGTATTTTGGT
*
70551 AAAATAAGCTTACGAGATTATGGGATAAATGGTAAG
1 AAAATAAGCTTACGAGCTTATGGGATAAATGGTAAG
70587 AGATTTTATC
Statistics
Matches: 76, Mismatches: 4, Indels: 3
0.92 0.05 0.04
Matches are distributed among these distances:
44 24 0.32
45 12 0.16
46 40 0.53
ACGTcount: A:0.39, C:0.07, G:0.24, T:0.30
Consensus pattern (45 bp):
AAAATAAGCTTACGAGCTTATGGGATAAATGGTAAGTATTTTGGT
Found at i:73849 original size:31 final size:31
Alignment explanation
Indices: 73811--73899 Score: 115
Period size: 31 Copynumber: 2.9 Consensus size: 31
73801 CTAGATACTA
*
73811 GTCAAATTTGCATTCAGATAATGCACAATAT
1 GTCAAATTTGCATTCAGATAATGCACAACAT
* * *
73842 GTCAAATTTGCATTTAGATAATGCATAGCAT
1 GTCAAATTTGCATTCAGATAATGCACAACAT
** *
73873 GTCAGGTTTGCATTCAGATAATACACA
1 GTCAAATTTGCATTCAGATAATGCACA
73900 TGAGTATCAG
Statistics
Matches: 49, Mismatches: 9, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
31 49 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.33
Consensus pattern (31 bp):
GTCAAATTTGCATTCAGATAATGCACAACAT
Found at i:75458 original size:119 final size:119
Alignment explanation
Indices: 75245--75483 Score: 435
Period size: 119 Copynumber: 2.0 Consensus size: 119
75235 AGAAACACTG
75245 TGGTGTGGATAAAAGAAGAAGAAAGCCACTTCCTCCATTATTGCAAGTACAGAGAATGAGATGGC
1 TGGTGTGGATAAAAGAAGAAGAAAGCCACTTCCTCCATTATTGCAAGTACAGAGAATGAGATGGC
*
75310 TGGGGATGTAGACGATGACTTCACGAAAGAGAATG-CAGATACTATAATGACGTT
66 TGGGGATGTAGACGATGACTTCACCAAAGAGAATGCCA-ATACTATAATGACGTT
*
75364 TGGTGTGGATAAAAGAAGAAGAAAGCCACTTCCTCCATTATTGCAAGTGCAGAGAATGAGATGGC
1 TGGTGTGGATAAAAGAAGAAGAAAGCCACTTCCTCCATTATTGCAAGTACAGAGAATGAGATGGC
*
75429 TGGGGATTTAGACGATGACTTCACCAAAGAGAATGCCAATACTATAATGACGTT
66 TGGGGATGTAGACGATGACTTCACCAAAGAGAATGCCAATACTATAATGACGTT
75483 T
1 T
75484 TCTTGTATGG
Statistics
Matches: 116, Mismatches: 3, Indels: 2
0.96 0.02 0.02
Matches are distributed among these distances:
119 114 0.98
120 2 0.02
ACGTcount: A:0.36, C:0.15, G:0.26, T:0.23
Consensus pattern (119 bp):
TGGTGTGGATAAAAGAAGAAGAAAGCCACTTCCTCCATTATTGCAAGTACAGAGAATGAGATGGC
TGGGGATGTAGACGATGACTTCACCAAAGAGAATGCCAATACTATAATGACGTT
Found at i:76087 original size:2 final size:2
Alignment explanation
Indices: 76080--76105 Score: 52
Period size: 2 Copynumber: 13.0 Consensus size: 2
76070 AATGTTGCTG
76080 AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT
76106 TCATATTCTT
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 24 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:77628 original size:36 final size:35
Alignment explanation
Indices: 77547--77666 Score: 188
Period size: 36 Copynumber: 3.4 Consensus size: 35
77537 AGATGAACAA
77547 TTGAATCGAAAGTG-CGGATGCTTCCTTCCGTTCAC
1 TTGAATCGAAAGTGTC-GATGCTTCCTTCCGTTCAC
* *
77582 TTGAATCGAAAGTGTCGATGCTTCCTTTCGTTCTTC
1 TTGAATCGAAAGTGTCGATGCTTCCTTCCGTTC-AC
77618 TTGAATCGAAAGTGTCGATGCTTCCTTCCGTTCAC
1 TTGAATCGAAAGTGTCGATGCTTCCTTCCGTTCAC
77653 TTTGAATCGAAAGT
1 -TTGAATCGAAAGT
77667 TCTTGATATG
Statistics
Matches: 78, Mismatches: 4, Indels: 5
0.90 0.05 0.06
Matches are distributed among these distances:
35 31 0.40
36 47 0.60
ACGTcount: A:0.21, C:0.23, G:0.21, T:0.36
Consensus pattern (35 bp):
TTGAATCGAAAGTGTCGATGCTTCCTTCCGTTCAC
Found at i:82525 original size:14 final size:14
Alignment explanation
Indices: 82508--82544 Score: 74
Period size: 14 Copynumber: 2.6 Consensus size: 14
82498 AGATTTTTAC
82508 GCAGGGATTTATTT
1 GCAGGGATTTATTT
82522 GCAGGGATTTATTT
1 GCAGGGATTTATTT
82536 GCAGGGATT
1 GCAGGGATT
82545 ACTTCTCATT
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 23 1.00
ACGTcount: A:0.22, C:0.08, G:0.32, T:0.38
Consensus pattern (14 bp):
GCAGGGATTTATTT
Found at i:83606 original size:44 final size:43
Alignment explanation
Indices: 83514--83609 Score: 140
Period size: 44 Copynumber: 2.2 Consensus size: 43
83504 GACCTTTTAA
*
83514 ATTTAAATTGTAAGTTACGGTTAAAGTGCATATGATTGGATTG
1 ATTTAAATTGTAAGTTAAGGTTAAAGTGCATATGATTGGATTG
* *
83557 ATTTAAATTGTAAGTTAATGTTATAGTTGCACT-TGATTGGATTG
1 ATTTAAATTGTAAGTTAAGGTTAAAG-TGCA-TATGATTGGATTG
83601 ATTTAAATT
1 ATTTAAATT
83610 ATATATAAAT
Statistics
Matches: 48, Mismatches: 3, Indels: 3
0.89 0.06 0.06
Matches are distributed among these distances:
43 23 0.48
44 24 0.50
45 1 0.02
ACGTcount: A:0.32, C:0.04, G:0.20, T:0.44
Consensus pattern (43 bp):
ATTTAAATTGTAAGTTAAGGTTAAAGTGCATATGATTGGATTG
Found at i:83724 original size:66 final size:67
Alignment explanation
Indices: 83618--83749 Score: 239
Period size: 66 Copynumber: 2.0 Consensus size: 67
83608 TTATATATAA
*
83618 ATGATAAATTATTTCATGGACTCTTTCCACTACGTCATAAT-GTTAATCTAGTTTGGATTAAGGC
1 ATGATAAATTATTTCATGGACTCTTTCCACTACGTCATAATGGTTAATCTAGTTTGAATTAAGGC
83682 AT
66 AT
*
83684 ATGATAAATTATTTCATGGACTCTTTCCACTACGTCATAATGGTTAATCTAGTTTGAATTGAGGC
1 ATGATAAATTATTTCATGGACTCTTTCCACTACGTCATAATGGTTAATCTAGTTTGAATTAAGGC
83749 A
66 A
83750 GATGCACTAA
Statistics
Matches: 63, Mismatches: 2, Indels: 1
0.95 0.03 0.02
Matches are distributed among these distances:
66 41 0.65
67 22 0.35
ACGTcount: A:0.30, C:0.15, G:0.16, T:0.39
Consensus pattern (67 bp):
ATGATAAATTATTTCATGGACTCTTTCCACTACGTCATAATGGTTAATCTAGTTTGAATTAAGGC
AT
Found at i:93028 original size:30 final size:30
Alignment explanation
Indices: 92952--93035 Score: 96
Period size: 33 Copynumber: 2.7 Consensus size: 30
92942 CTCCTCATCT
* * *
92952 TCTTCTTTGTGTTTGCTTACTTCTTCCTGC
1 TCTTCTTCGTGTTTGCTTGCTTCATCCTGC
*
92982 TCCTCCTCTTCGTGTTTGCTTGTTTCATCCTGC
1 T-CT--TCTTCGTGTTTGCTTGCTTCATCCTGC
*
93015 TCTTCTTCATGTTTGCTTGCT
1 TCTTCTTCGTGTTTGCTTGCT
93036 CCTTAATACT
Statistics
Matches: 45, Mismatches: 6, Indels: 6
0.79 0.11 0.11
Matches are distributed among these distances:
30 17 0.38
31 2 0.04
32 2 0.04
33 24 0.53
ACGTcount: A:0.04, C:0.29, G:0.14, T:0.54
Consensus pattern (30 bp):
TCTTCTTCGTGTTTGCTTGCTTCATCCTGC
Found at i:95596 original size:29 final size:30
Alignment explanation
Indices: 95563--95642 Score: 126
Period size: 29 Copynumber: 2.7 Consensus size: 30
95553 TATGTGATGT
*
95563 TCCGAAGAACATAGGTAATCA-TCCATATG
1 TCCGAAGAACATAGGTAAACAGTCCATATG
95592 TCCGAAGAACATAGGTAAACAGTCCATATG
1 TCCGAAGAACATAGGTAAACAGTCCATATG
*
95622 TCCATAAGAACATAGGTAAAC
1 TCC-GAAGAACATAGGTAAAC
95643 CCTCGACCCT
Statistics
Matches: 47, Mismatches: 2, Indels: 2
0.92 0.04 0.04
Matches are distributed among these distances:
29 20 0.43
30 11 0.23
31 16 0.34
ACGTcount: A:0.41, C:0.20, G:0.17, T:0.21
Consensus pattern (30 bp):
TCCGAAGAACATAGGTAAACAGTCCATATG
Found at i:95842 original size:22 final size:23
Alignment explanation
Indices: 95817--95860 Score: 72
Period size: 22 Copynumber: 2.0 Consensus size: 23
95807 CATATACTTT
*
95817 TTTCACATATATA-TTTCATATA
1 TTTCACATATACACTTTCATATA
95839 TTTCACATATACACTTTCATAT
1 TTTCACATATACACTTTCATAT
95861 CACATGCCAT
Statistics
Matches: 20, Mismatches: 1, Indels: 1
0.91 0.05 0.05
Matches are distributed among these distances:
22 12 0.60
23 8 0.40
ACGTcount: A:0.34, C:0.18, G:0.00, T:0.48
Consensus pattern (23 bp):
TTTCACATATACACTTTCATATA
Found at i:105771 original size:19 final size:19
Alignment explanation
Indices: 105747--105787 Score: 82
Period size: 19 Copynumber: 2.2 Consensus size: 19
105737 ATTTCTTTTG
105747 GAAAGCAAAGTAAGGGAAA
1 GAAAGCAAAGTAAGGGAAA
105766 GAAAGCAAAGTAAGGGAAA
1 GAAAGCAAAGTAAGGGAAA
105785 GAA
1 GAA
105788 TAACTGGAGA
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
19 22 1.00
ACGTcount: A:0.59, C:0.05, G:0.32, T:0.05
Consensus pattern (19 bp):
GAAAGCAAAGTAAGGGAAA
Found at i:107532 original size:6 final size:6
Alignment explanation
Indices: 107314--107528 Score: 313
Period size: 6 Copynumber: 35.8 Consensus size: 6
107304 CTCGGCTCGT
*
107314 GGTCGT GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA
1 GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA
* * * *
107362 GGTCGT GGTCGT GGTCGA GGTCGA GGTCGA GGTCGT GGTCGT GGTCGA
1 GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA
* *
107410 GGTCGA GGTCGA GGTCGT GCTCGA GGTCGA GGTCGA GGTCGA GGTCGA
1 GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA
* * *
107458 GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGT GGTCGT GGTCGT
1 GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA GGTCGA
* * *
107506 GGTCGT GGTCGT GGTCGT GGTCG
1 GGTCGA GGTCGA GGTCGA GGTCG
107529 TGGTAATACG
Statistics
Matches: 199, Mismatches: 10, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
6 199 1.00
ACGTcount: A:0.11, C:0.17, G:0.50, T:0.22
Consensus pattern (6 bp):
GGTCGA
Found at i:113385 original size:5 final size:5
Alignment explanation
Indices: 113366--113414 Score: 62
Period size: 5 Copynumber: 9.8 Consensus size: 5
113356 GTCCGTCCGT
* * * *
113366 CTCGT CTCGG CTCGG CTCGG CACGG CACGG CTCGG CTCGG CTTGG CTCG
1 CTCGG CTCGG CTCGG CTCGG CTCGG CTCGG CTCGG CTCGG CTCGG CTCG
113415 TGGTCGTGGT
Statistics
Matches: 39, Mismatches: 5, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
5 39 1.00
ACGTcount: A:0.04, C:0.39, G:0.37, T:0.20
Consensus pattern (5 bp):
CTCGG
Found at i:113423 original size:6 final size:6
Alignment explanation
Indices: 113412--113490 Score: 104
Period size: 6 Copynumber: 13.2 Consensus size: 6
113402 TCGGCTTGGC
* * *
113412 TCGTGG TCGTGG TCGTGG TCGTGG TCGAGG TCGAGG TCGAGG TCGTGG
1 TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG
* * *
113460 TCGAGT TCGTGG TCATGG TCGTGG TCGTGG T
1 TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG T
113491 AATACGTGTC
Statistics
Matches: 65, Mismatches: 8, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
6 65 1.00
ACGTcount: A:0.06, C:0.16, G:0.47, T:0.30
Consensus pattern (6 bp):
TCGTGG
Found at i:119371 original size:5 final size:5
Alignment explanation
Indices: 119363--119406 Score: 61
Period size: 5 Copynumber: 8.8 Consensus size: 5
119353 TCCGTCTAGT
* * *
119363 CTCGG CTCGG CTCGG CACGG CACGG CTCGG CTCGG CTTGG CTCG
1 CTCGG CTCGG CTCGG CTCGG CTCGG CTCGG CTCGG CTCGG CTCG
119407 TGGTCGTGGT
Statistics
Matches: 35, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
5 35 1.00
ACGTcount: A:0.05, C:0.39, G:0.39, T:0.18
Consensus pattern (5 bp):
CTCGG
Found at i:119415 original size:6 final size:6
Alignment explanation
Indices: 119404--119536 Score: 194
Period size: 6 Copynumber: 22.2 Consensus size: 6
119394 TCGGCTTGGC
* * *
119404 TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGAGG TCGAGG TCGAGG
1 TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG
* * *
119452 TCGAGG TCGTGG TCGTGG TCGAGT TCGTGG TCGTGG TCGTGG TCGTGG
1 TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG
* *
119500 TCGAGT TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG T
1 TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG TCGTGG T
119537 AATACGTGTC
Statistics
Matches: 117, Mismatches: 10, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
6 117 1.00
ACGTcount: A:0.05, C:0.17, G:0.48, T:0.31
Consensus pattern (6 bp):
TCGTGG
Done.