Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008626.1 Hibiscus syriacus cultivar Beakdansim tig00111589_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62863

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15737--15788
8
6.5
8
97
0
95
40
0
26
32
1.57
17895--17935
17
2.4
17
87
4
55
36
2
17
43
1.62
17905--17942
17
2.2
17
95
0
67
34
2
21
42
1.67
18662--18717
21
2.7
21
91
0
94
33
12
17
35
1.88
19270--19358
44
2.0
44
93
0
151
39
8
23
28
1.85
28262--28399
70
2.0
71
80
1
161
36
18
20
24
1.95
33053--33086
17
2.1
16
88
5
50
76
0
8
14
1.01
36104--36146
20
2.2
20
87
4
61
67
0
13
18
1.23
42498--42531
17
2.1
16
88
5
50
76
0
8
14
1.01
46714--46840
3
42.7
3
90
4
204
62
0
1
35
1.04
47158--47902
113
6.6
113
97
1
1376
28
18
14
37
1.91
48493--49127
82
7.7
82
91
2
961
35
21
13
29
1.92
48493--49127
165
3.8
164
92
1
984
35
21
13
29
1.92
48493--49127
247
2.6
248
92
1
1067
35
21
13
29
1.92
50242--50294
20
2.7
20
82
14
65
5
15
0
79
0.91

Tables:   1

The End!