Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000863.1 Hibiscus syriacus cultivar Beakdansim tig00001669_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81143

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1015--1054
17
2.4
17
87
8
55
40
0
0
60
0.97
2762--2893
71
1.9
71
88
3
203
36
18
13
31
1.90
3959--3987
14
2.0
15
93
6
51
41
0
3
55
1.17
4439--4463
2
12.5
2
100
0
50
52
0
0
48
1.00
17611--17669
31
1.9
31
89
0
91
45
6
13
33
1.70
19789--19895
20
5.4
20
76
6
110
44
27
9
18
1.80
19789--19895
39
2.7
40
84
8
130
44
27
9
18
1.80
19871--19957
21
4.2
21
85
2
106
45
16
18
19
1.85
20317--20391
21
3.6
21
83
3
89
22
14
13
49
1.78
20327--20391
21
3.1
21
86
4
96
24
13
10
50
1.74
24970--25094
60
2.1
59
82
8
146
41
5
17
35
1.73
27786--27852
32
2.1
32
97
0
125
37
5
5
50
1.51
28638--28666
3
9.7
3
100
0
58
34
0
0
65
0.93
36094--36145
25
2.1
25
82
7
61
55
7
7
28
1.56
36596--36656
23
2.7
23
89
2
88
21
24
31
22
1.98
53653--53924
143
1.9
143
96
1
501
39
8
8
43
1.67
56171--56213
4
10.8
4
100
0
86
51
23
0
25
1.49
62114--62175
22
2.9
22
82
17
62
53
8
0
38
1.31
69180--69257
41
1.9
41
97
0
147
26
10
16
46
1.79
78835--78876
16
2.7
16
81
3
50
54
4
4
35
1.42
79886--79937
15
3.5
15
89
0
77
7
65
17
9
1.45

Tables:   1

The End!