Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008634.1 Hibiscus syriacus cultivar Beakdansim tig00111606_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98388

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2524--2749
42
5.3
43
85
6
302
26
24
17
31
1.97
2524--2749
85
2.7
83
89
5
348
26
24
17
31
1.97
3862--3914
25
2.2
24
82
3
61
41
1
3
52
1.30
4061--4102
18
2.3
18
80
8
50
73
7
2
16
1.15
5439--5506
3
22.7
3
94
5
120
66
0
0
33
0.92
5823--7139
113
11.6
113
96
0
2318
29
19
12
38
1.89
7816--8206
83
4.7
84
88
4
560
37
22
12
28
1.90
20800--20841
18
2.3
18
80
8
50
71
7
2
19
1.20
22187--22242
3
18.7
3
100
0
112
66
0
0
33
0.92
28685--28762
3
26.0
3
86
0
111
62
0
3
33
1.13
33844--33882
2
20.0
2
94
5
71
48
0
0
51
1.00
45468--45500
7
4.7
7
100
0
66
27
15
0
57
1.38
51264--51304
2
20.5
2
100
0
82
51
0
0
48
1.00
55164--55245
33
2.5
33
82
13
114
35
2
6
56
1.37
64479--64561
43
1.9
43
97
0
157
44
9
18
27
1.80
69168--69207
17
2.4
17
100
0
80
30
27
17
25
1.97
74188--74231
20
2.2
19
84
15
54
63
4
4
27
1.33
85577--85618
2
21.0
2
100
0
84
50
0
0
50
1.00
88579--88627
25
1.9
25
87
4
71
14
10
4
71
1.27

Tables:   1

The End!