Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008635.1 Hibiscus syriacus cultivar Beakdansim tig00111608_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48809

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1649--1697
23
2.3
21
86
10
64
20
36
20
22
1.95
5870--6038
93
1.8
91
87
5
250
31
18
10
39
1.85
11356--11399
23
1.9
23
90
0
70
29
9
29
31
1.88
12889--12930
20
2.2
20
86
4
59
33
21
14
30
1.93
13917--13966
18
2.8
18
96
0
91
24
34
26
16
1.95
14713--14770
20
2.7
20
86
10
71
27
22
18
31
1.97
14758--14918
64
2.5
63
80
11
184
23
26
18
31
1.97
16275--16474
55
3.6
55
95
0
346
30
22
20
28
1.98
21922--21951
13
2.3
13
94
0
51
53
6
10
30
1.60
32474--32514
19
2.2
19
86
8
57
53
7
9
29
1.60
39777--40311
178
3.0
178
99
0
1043
41
19
17
22
1.90
43290--43336
2
23.5
2
100
0
94
48
0
0
51
1.00
48257--48295
18
2.2
18
90
9
62
51
5
15
28
1.64

Tables:   1

The End!