Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008649.1 Hibiscus syriacus cultivar Beakdansim tig00111639_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25997

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--85
22
3.0
22
95
2
116
19
26
28
25
1.99
3187--3231
21
2.1
21
87
0
63
31
28
24
15
1.96
4902--4968
22
3.0
22
95
2
116
19
26
28
25
1.99
10296--10365
18
3.8
18
80
9
88
8
17
7
67
1.40
10282--10376
38
2.5
38
94
0
163
10
14
8
66
1.44
13673--13708
18
2.0
18
88
0
54
30
8
16
44
1.77
16497--16557
2
30.5
2
93
0
104
50
1
0
47
1.10
18526--18567
21
2.1
19
86
8
57
28
11
11
47
1.76
20203--20233
15
2.1
15
93
0
53
45
0
0
54
0.99
20383--20425
20
2.3
18
80
11
50
20
25
9
44
1.81
22378--22419
18
2.3
18
95
0
75
21
38
23
16
1.93
24852--24921
23
3.0
23
78
12
72
21
11
17
50
1.77

Tables:   1

The End!