Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008663.1 Hibiscus syriacus cultivar Beakdansim tig00111665_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91981

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1920--2116
105
1.9
104
93
1
340
34
18
21
26
1.96
16155--16197
23
1.9
21
81
13
50
34
13
18
32
1.90
18004--18054
20
2.6
20
90
3
77
35
15
5
43
1.71
22188--22238
20
2.6
20
90
3
77
35
15
5
43
1.71
30362--30408
19
2.5
18
80
16
51
2
17
2
78
0.94
30751--30789
20
1.9
21
84
5
53
33
0
38
28
1.57
32577--32656
35
2.2
36
93
2
135
27
3
38
30
1.74
38089--38173
35
2.4
35
86
2
125
28
3
37
30
1.74
40570--40649
11
6.8
11
71
22
56
31
37
2
28
1.71
40570--40657
35
2.5
36
84
1
124
31
36
2
29
1.70
47657--47707
19
2.6
20
90
3
77
43
5
15
35
1.71
51074--51125
10
5.0
10
81
4
50
0
19
1
78
0.84
51072--51126
18
3.0
18
85
15
69
0
20
3
76
0.94
51848--51898
19
2.6
20
90
3
77
43
5
15
35
1.71
75517--75573
28
2.1
26
83
6
69
8
15
15
59
1.59
77601--77637
14
2.7
14
91
4
58
21
45
0
32
1.52
80259--80325
33
2.1
33
86
13
95
56
0
23
19
1.42
80848--80898
19
2.6
20
90
3
77
43
5
11
39
1.66
90241--90342
35
2.9
35
83
1
132
33
4
34
27
1.78

Tables:   1

The End!