Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008664.1 Hibiscus syriacus cultivar Beakdansim tig00111667_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53360

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6845--6943
10
10.3
9
79
12
90
15
28
27
29
1.96
6846--6943
19
5.1
19
79
16
87
14
28
27
29
1.95
6844--6918
29
2.5
30
89
8
118
17
26
26
29
1.97
6845--6943
29
3.4
28
84
8
101
15
28
27
29
1.96
6940--6997
5
10.8
5
78
14
62
18
51
22
6
1.70
6940--7004
22
3.0
22
100
0
130
18
49
23
9
1.76
6994--7031
7
5.4
7
100
0
76
15
28
28
26
1.96
11374--11478
51
2.1
51
100
0
210
28
13
14
43
1.83
11629--11664
18
2.0
18
100
0
72
33
5
22
38
1.77
17662--17704
22
2.1
20
87
12
61
51
2
0
46
1.13
21541--21623
29
2.8
29
92
1
139
43
9
14
32
1.78
26309--26391
29
2.8
29
92
1
139
43
9
14
32
1.78
32997--33021
12
2.1
12
100
0
50
52
32
0
16
1.44
46189--46236
13
3.5
13
72
10
51
37
4
10
47
1.57
46173--46245
28
2.6
28
97
0
137
34
8
10
46
1.69
49216--49661
227
2.0
226
94
1
777
45
8
6
39
1.61
49726--49771
20
2.3
20
86
13
69
56
10
17
15
1.67

Tables:   1

The End!