Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008672.1 Hibiscus syriacus cultivar Beakdansim tig00111685_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46452

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5579--5612
17
2.0
17
88
0
50
38
2
14
44
1.61
5814--5840
2
13.5
2
100
0
54
51
0
48
0
1.00
8080--8119
20
2.0
21
90
5
64
35
5
15
45
1.68
8027--8176
53
2.9
52
94
3
257
32
6
14
46
1.70
8133--8172
20
2.0
20
95
0
71
37
5
12
45
1.64
13236--13279
21
2.1
21
83
8
54
15
15
0
68
1.22
13582--13628
24
2.0
24
84
12
62
10
10
4
74
1.20
24109--24157
1
49.0
1
83
0
62
91
0
8
0
0.41
24108--24157
10
4.9
10
90
9
75
90
0
10
0
0.47
24109--24157
11
4.5
11
92
7
82
91
0
8
0
0.41
24942--25575
105
6.0
105
97
0
1142
34
25
17
22
1.96
25633--25674
20
2.1
20
95
0
75
26
21
16
35
1.94
27323--27367
21
2.1
21
84
8
56
17
15
0
66
1.25
27586--27618
17
2.0
17
88
5
50
3
18
0
78
0.87
27668--27714
24
2.0
24
84
12
62
12
10
2
74
1.16
38947--38976
13
2.3
13
100
0
60
40
0
0
60
0.97
41780--41840
21
2.9
21
85
7
70
26
29
16
27
1.97
42117--42156
18
2.1
18
86
9
53
30
17
5
47
1.69
43189--43222
18
1.9
18
94
5
61
17
20
5
55
1.62
45203--45391
64
2.9
63
79
13
151
30
16
21
32
1.95
45246--45391
65
2.3
65
82
8
165
30
16
21
32
1.95
45711--45738
12
2.3
12
100
0
56
39
7
7
46
1.59

Tables:   1

The End!