Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008673.1 Hibiscus syriacus cultivar Beakdansim tig00111686_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15709

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1440--1481
22
1.9
22
85
0
57
23
7
0
69
1.13
11942--12017
1
76.0
1
76
0
62
86
0
13
0
0.56
11941--12018
28
2.8
27
84
11
95
84
0
15
0
0.62
11944--12017
34
2.3
32
88
9
114
86
0
13
0
0.57
12345--12389
18
2.6
17
89
6
65
31
6
8
53
1.58
12997--13296
49
6.0
50
90
7
477
24
14
23
38
1.92
12989--13290
101
3.0
100
91
7
497
23
14
23
38
1.92
12991--13302
150
2.1
151
92
4
524
24
15
23
37
1.93
13325--13553
50
4.6
50
88
7
340
24
14
22
38
1.92
13325--13553
98
2.3
100
87
7
340
24
14
22
38
1.92
13046--13643
277
2.2
276
86
8
817
25
14
22
37
1.92
14183--14849
114
5.8
113
92
5
1069
36
13
19
29
1.91
15091--15202
3
36.7
3
84
10
147
34
1
0
63
1.05
15094--15210
43
2.8
43
84
8
161
35
1
0
62
1.06

Tables:   1

The End!