Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008678.1 Hibiscus syriacus cultivar Beakdansim tig00111697_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34442

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2995--3172
45
3.9
45
83
5
234
28
23
11
37
1.90
3147--3268
44
2.7
44
87
7
165
24
20
6
48
1.73
3263--3659
68
5.9
68
90
2
638
30
25
14
28
1.95
3263--3651
201
1.9
203
94
1
692
30
25
14
29
1.95
6525--6566
13
3.2
13
86
0
57
28
21
14
35
1.92
12751--12980
76
3.0
76
92
1
390
37
7
24
30
1.84
16138--16162
11
2.3
11
100
0
50
36
0
36
28
1.58
16699--16818
41
2.9
40
77
13
109
30
17
23
28
1.97
18786--18952
81
2.1
81
90
0
262
13
34
23
28
1.92
26615--26657
21
2.0
21
81
0
50
30
30
25
13
1.94
26637--26788
68
2.2
68
90
1
234
26
28
27
17
1.97
27090--27161
29
2.5
29
90
4
110
37
9
12
40
1.76
27176--27235
30
2.0
31
90
3
95
36
6
23
33
1.81
27455--27522
22
3.0
22
97
2
127
19
26
27
26
1.99
33560--33709
67
2.3
67
88
3
214
27
28
27
17
1.98
34008--34079
29
2.5
29
90
4
110
37
9
12
40
1.76
34094--34153
30
2.0
31
90
3
95
36
6
23
33
1.81
34377--34431
20
2.5
22
91
8
87
16
29
27
27
1.97
34377--34439
23
2.9
23
88
6
78
17
26
25
30
1.97

Tables:   1

The End!