Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008682.1 Hibiscus syriacus cultivar Beakdansim tig00111704_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58793

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6267--6316
26
1.9
26
95
0
91
34
12
14
40
1.82
8085--8134
21
2.3
22
82
6
66
40
2
2
56
1.22
11920--11982
31
2.0
31
81
9
74
47
3
6
42
1.44
12090--12115
9
2.9
9
100
0
52
57
0
0
42
0.98
21521--21553
17
1.9
17
88
11
50
72
0
6
21
1.05
21550--21928
193
2.0
183
86
9
525
57
4
7
30
1.46
22904--22938
3
11.7
3
100
0
70
68
0
0
31
0.90
23407--24178
105
7.4
105
95
0
1345
23
18
25
32
1.97
24910--24944
1
35.0
1
100
0
70
0
0
0
100
0.00
35943--35980
8
5.0
8
87
9
53
52
7
0
39
1.31
35691--36091
204
2.0
195
90
5
626
57
3
7
30
1.44
37070--37104
3
11.7
3
100
0
70
68
0
0
31
0.90
42322--42353
2
16.0
2
100
0
64
50
0
50
0
1.00
42706--42771
33
1.9
35
82
11
84
51
4
0
43
1.22
45577--45612
18
2.0
18
88
0
54
38
0
5
55
1.23
47332--47372
22
2.0
20
85
9
55
24
7
4
63
1.40
48498--48558
2
30.5
2
100
0
122
49
0
0
50
1.00
56886--57080
101
1.9
101
84
2
257
24
12
23
39
1.89
58247--58379
47
3.0
47
90
6
197
41
16
15
26
1.88

Tables:   1

The End!