Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008688.1 Hibiscus syriacus cultivar Beakdansim tig00111712_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67242

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2313--2361
23
2.1
23
85
7
64
57
12
2
28
1.46
5645--5689
20
2.2
20
84
0
54
62
0
24
13
1.31
11979--12018
16
2.6
16
88
4
64
82
0
5
12
0.82
12497--12545
23
2.1
23
85
7
64
57
12
2
28
1.46
22498--22556
30
2.0
30
93
6
102
35
3
16
44
1.65
22671--22735
17
4.0
16
86
8
78
26
30
15
27
1.96
22671--22717
15
3.0
15
90
6
67
25
29
17
27
1.97
22671--22734
32
2.0
32
84
6
85
26
29
15
28
1.96
22767--22808
21
2.0
21
90
9
68
33
23
23
19
1.97
22837--22876
20
1.9
22
90
10
66
42
35
10
12
1.76
23090--23159
34
2.1
32
86
5
95
31
15
28
24
1.96
25288--25356
30
2.2
30
85
15
95
34
5
17
42
1.73
25297--25356
30
2.0
30
93
6
104
33
6
16
43
1.74
25436--25487
21
2.5
21
100
0
104
19
40
21
19
1.92
25491--25530
16
2.5
16
91
0
62
27
22
12
37
1.90
26707--26762
27
2.1
27
86
0
76
17
26
12
42
1.85
29528--29580
8
6.6
8
75
16
56
15
39
24
20
1.91
29520--29558
18
2.2
18
90
0
60
20
46
20
12
1.83
29550--29581
7
4.4
7
92
7
55
12
34
28
25
1.92
29547--29580
15
2.3
15
100
0
68
14
35
26
23
1.94
32043--32151
24
4.5
24
75
4
103
20
15
16
47
1.82
34299--34334
12
2.8
13
83
8
56
16
47
22
13
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34281--34346
30
2.2
30
88
2
105
18
43
22
15
1.87
34277--34345
18
4.2
18
71
21
69
18
46
20
14
1.84
34286--34354
30
2.5
28
86
11
90
17
43
23
15
1.87
34334--34367
15
2.3
15
94
0
59
14
38
26
20
1.91
36829--36937
24
4.5
24
75
4
103
20
15
16
47
1.82
39566--39597
2
16.0
2
100
0
64
50
0
0
50
1.00
44555--44617
33
1.9
33
90
0
99
12
9
17
60
1.58
46644--46691
22
2.2
21
85
3
60
12
10
12
64
1.50
48187--48296
42
2.6
44
83
9
131
40
17
22
20
1.92
48187--48321
43
3.2
42
82
7
130
40
17
21
20
1.92
49825--49862
9
4.2
9
87
12
60
36
0
52
10
1.36
59426--59622
89
2.2
91
90
5
319
28
26
23
20
1.99

Tables:   1

The End!