Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000869.1 Hibiscus syriacus cultivar Beakdansim tig00001680_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108642

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
628--682
3
18.0
3
88
3
74
38
0
0
61
0.96
2038--2341
138
2.2
136
77
13
316
41
7
6
44
1.60
7390--7427
20
2.0
20
85
10
53
55
7
13
23
1.64
13122--13166
21
2.1
21
83
0
54
17
26
28
26
1.98
14397--14437
19
2.2
20
86
8
59
29
4
9
56
1.53
21550--21919
201
1.8
199
84
5
505
28
17
21
32
1.96
44835--44882
14
3.2
15
81
16
55
29
0
0
70
0.87
44848--44883
15
2.2
17
90
9
58
25
0
0
75
0.81
44848--44886
8
4.8
8
87
12
53
28
0
0
71
0.86
54001--54046
14
3.3
14
90
0
65
63
19
8
8
1.49
53989--54052
24
2.7
24
78
4
67
64
20
6
9
1.45
58000--58039
12
3.3
12
93
6
64
27
42
7
22
1.80
59323--59402
40
1.9
41
85
7
108
38
12
10
38
1.77
59731--59784
17
3.2
17
77
15
58
40
0
1
57
1.09
65563--65597
15
2.2
16
90
5
54
42
0
11
45
1.40
65631--65861
127
1.8
127
85
4
331
36
11
10
41
1.76
67195--67237
23
1.9
22
86
13
61
53
2
32
11
1.50
80849--81052
29
7.0
28
74
12
121
33
8
3
53
1.49
80851--81064
30
7.3
29
77
5
171
34
7
3
54
1.47
81084--81164
27
3.0
26
82
12
94
49
0
7
43
1.30
81083--81248
26
6.2
27
73
15
114
52
0
6
40
1.30
84853--84900
17
2.7
18
83
9
62
54
6
0
39
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94106--94143
15
2.5
15
100
0
76
65
13
21
0
1.26

Tables:   1

The End!