Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008696.1 Hibiscus syriacus cultivar Beakdansim tig00111726_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52163

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7449--7523
31
2.3
32
82
8
91
32
38
2
26
1.70
11909--11993
11
7.2
11
72
22
66
31
36
3
28
1.74
11907--12008
36
2.9
36
92
4
165
31
36
2
29
1.72
11969--12008
20
2.0
20
85
14
55
35
35
0
30
1.58
17700--17761
27
2.2
28
78
13
74
8
17
14
59
1.58
23417--23468
17
3.1
17
86
5
70
40
13
5
40
1.68
25010--25078
33
2.1
33
83
5
86
30
36
1
31
1.67
29437--29549
36
3.2
36
92
1
174
32
36
3
27
1.74
29437--29535
13
8.3
11
71
23
67
31
36
3
29
1.73
29449--29588
36
4.1
33
83
9
97
30
36
2
30
1.72
32707--32751
22
2.1
21
84
12
56
44
35
2
17
1.62
33073--33115
17
2.6
17
82
14
54
79
2
16
2
0.95
33073--33115
16
2.6
17
89
10
63
79
2
16
2
0.95
43470--43538
33
2.1
33
83
5
86
31
1
36
30
1.67
43524--43620
13
8.0
12
72
22
62
28
3
37
30
1.73
43509--43621
36
3.2
36
92
1
174
27
3
36
32
1.74
45294--45362
33
2.1
33
83
5
86
31
1
36
30
1.67
45348--45441
13
8.0
12
73
20
67
27
3
38
30
1.73
45333--45442
33
3.2
35
88
6
152
26
3
37
32
1.74

Tables:   1

The End!