Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008698.1 Hibiscus syriacus cultivar Beakdansim tig00111730_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66933

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3932--3962
15
2.1
14
94
5
53
0
19
3
77
0.90
5969--6001
13
2.6
13
95
4
59
27
30
0
42
1.56
10984--11034
20
2.6
20
90
3
77
35
15
5
43
1.71
11692--11738
16
3.1
14
87
9
58
76
2
19
2
0.99
11706--11738
5
6.8
5
86
6
50
78
0
21
0
0.75
15090--15140
20
2.6
20
90
3
77
35
15
5
43
1.71
19222--19272
20
2.6
20
90
3
77
35
15
5
43
1.71
23360--23410
20
2.6
20
90
3
77
35
15
5
43
1.71
24081--24140
18
3.4
18
78
15
63
75
3
16
5
1.12
27504--27553
19
2.6
19
93
0
82
34
16
6
44
1.72
31641--31691
20
2.6
20
90
3
77
35
15
5
43
1.71
35780--35829
19
2.6
19
93
0
82
34
16
6
44
1.72
36496--36552
17
3.4
17
75
20
50
73
3
17
5
1.16
39092--39116
13
1.9
13
100
0
50
84
8
0
8
0.79
45273--45323
20
2.6
20
90
3
77
35
15
5
43
1.71
48430--48486
30
1.9
30
85
0
78
26
5
8
59
1.48
49401--49451
20
2.6
20
90
3
77
35
15
5
43
1.71
60050--60080
8
3.9
8
100
0
62
22
25
12
38
1.90
60149--60183
13
2.8
12
87
12
52
0
22
0
77
0.78
63981--64038
22
2.6
22
76
7
64
65
8
17
8
1.45

Tables:   1

The End!