Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008699.1 Hibiscus syriacus cultivar Beakdansim tig00111731_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63812

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3028--3070
19
2.3
19
91
0
68
34
16
6
41
1.75
3036--3075
19
2.2
18
86
8
55
35
15
5
45
1.68
7149--7199
20
2.6
20
90
3
77
35
15
5
43
1.71
11281--11331
20
2.6
20
90
3
77
35
15
5
43
1.71
14593--14617
13
1.9
13
100
0
50
84
8
0
8
0.79
20782--20832
20
2.6
20
90
3
77
35
15
5
43
1.71
24922--24972
20
2.6
20
90
3
77
35
15
5
43
1.71
27431--27543
60
1.9
60
84
0
154
31
16
26
24
1.96
35628--35658
8
3.9
8
100
0
62
22
25
12
38
1.90
35729--35763
13
2.8
12
87
12
52
0
22
0
77
0.78
39600--39657
22
2.6
22
76
7
64
65
8
17
8
1.45
43373--43424
21
2.6
21
87
6
72
30
15
7
46
1.74
52638--52690
24
2.2
24
83
9
65
24
5
3
66
1.31
53945--54079
28
4.9
28
69
12
118
40
11
19
28
1.86
57286--57363
38
2.0
39
97
2
149
37
25
24
12
1.91
58192--58221
13
2.4
13
94
5
53
43
0
30
26
1.55
61587--61639
21
2.5
21
100
0
106
18
18
0
62
1.33
62613--62654
20
2.2
20
91
8
70
47
4
11
35
1.61

Tables:   1

The End!