Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008706.1 Hibiscus syriacus cultivar Beakdansim tig00111746_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76580

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1023--1482
230
2.0
228
93
0
776
31
21
15
31
1.94
8305--8346
18
2.3
18
100
0
84
38
33
16
11
1.86
11592--11631
18
2.2
18
86
8
55
22
2
2
72
1.09
14971--15031
25
2.4
25
97
0
113
54
0
26
19
1.45
15456--15493
20
2.0
19
90
10
60
34
15
26
23
1.95
16237--16299
21
3.0
20
79
9
72
30
20
22
26
1.98
16478--16506
15
1.9
15
100
0
58
48
27
6
17
1.72
16634--17019
183
2.1
184
90
3
611
43
3
8
45
1.49
24878--24940
32
2.0
32
84
6
85
31
6
9
52
1.59
31392--31467
29
2.6
31
80
14
90
23
7
7
60
1.51
31575--31605
6
5.2
6
100
0
62
16
0
0
83
0.64
37568--37608
18
2.3
18
91
0
64
75
0
19
4
0.98
37541--37625
9
9.1
9
70
11
55
77
0
17
4
0.93
37577--37616
17
2.3
18
86
4
55
77
0
20
2
0.88
40129--40251
31
4.0
31
81
6
133
29
19
20
30
1.97
42738--43532
233
3.4
231
86
4
1019
31
15
18
34
1.92
43400--43487
41
2.1
42
85
6
117
26
22
19
31
1.98
43815--44141
134
2.5
131
88
2
487
29
25
15
28
1.96
49704--49756
5
9.8
5
76
15
52
7
22
50
18
1.72
49697--49757
17
3.3
17
79
20
77
11
22
47
18
1.80
49690--49756
22
3.0
22
93
4
107
11
23
46
17
1.82
49753--49860
9
11.3
9
81
9
108
28
27
27
15
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49753--49840
19
4.7
18
82
12
106
27
29
28
14
1.95
49753--49860
38
2.8
37
83
10
121
28
27
27
15
1.96
57040--57092
5
9.8
5
76
15
52
7
22
50
18
1.72
57033--57093
17
3.3
17
79
20
77
11
22
47
18
1.80
57026--57092
22
3.0
22
93
4
107
11
23
46
17
1.82
57091--57188
19
5.1
19
80
13
101
28
27
26
17
1.98
57089--57187
9
10.3
9
80
10
90
28
27
28
16
1.97
57090--57187
29
3.4
28
85
5
124
28
27
27
16
1.97
76387--76414
11
2.5
11
100
0
56
53
0
14
32
1.41

Tables:   1

The End!