Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008711.1 Hibiscus syriacus cultivar Beakdansim tig00111762_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31969

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
366--408
1
43.0
1
88
0
59
2
4
0
93
0.43
13602--13676
25
3.0
25
96
0
132
26
14
20
38
1.91
13683--13753
22
3.5
22
69
25
75
8
19
43
28
1.80
13677--13776
37
2.7
37
100
0
200
7
19
45
29
1.76
13818--13864
3
16.0
3
87
12
71
68
0
0
31
0.90
13818--13872
13
4.0
14
83
9
69
70
0
0
29
0.87
13847--13880
13
2.5
13
90
4
50
79
0
0
20
0.73
13917--13957
20
2.0
20
90
9
66
48
0
0
51
1.00
13937--13986
14
3.4
14
78
15
57
46
2
0
52
1.12
23251--23305
5
11.2
5
77
9
51
72
0
7
20
1.07
23257--23293
20
1.9
20
94
5
67
70
0
5
24
1.08
23383--23490
22
4.9
21
70
23
80
62
0
4
33
1.16
23634--23664
2
15.5
2
100
0
62
51
0
0
48
1.00
24634--25789
106
11.0
106
89
2
1676
23
18
24
34
1.96
24634--25789
422
2.8
419
89
2
1713
23
18
24
34
1.96
25480--25776
105
3.0
96
77
11
285
25
18
23
33
1.97
26165--26201
18
2.0
19
89
5
58
40
35
5
18
1.74
26614--26666
22
2.5
22
90
6
83
26
13
26
33
1.93
27281--27316
16
2.3
16
90
4
56
0
11
5
83
0.80
27281--27321
16
2.7
15
85
7
55
2
9
4
82
0.89
31553--31595
18
2.4
18
88
0
59
69
0
9
20
1.15
31565--31604
18
2.2
18
90
0
62
75
2
5
17
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31667--31707
20
2.0
20
86
9
57
73
0
7
19
1.07
31788--31904
12
10.1
12
68
21
56
63
0
3
33
1.11
31776--31902
13
10.1
12
71
17
64
63
0
3
32
1.12
31850--31883
3
11.3
3
87
12
52
67
0
0
32
0.91

Tables:   1

The End!