Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008718.1 Hibiscus syriacus cultivar Beakdansim tig00111773_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53468

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3764--3793
13
2.4
13
94
5
53
26
30
0
43
1.55
7769--7835
27
2.4
28
76
16
68
64
14
13
7
1.49
9321--9368
24
2.0
25
83
4
62
50
12
25
12
1.75
17443--17471
10
2.9
10
100
0
58
31
10
31
27
1.90
23191--23243
21
2.7
20
82
8
72
37
13
5
43
1.67
26118--26159
22
2.0
21
85
4
57
26
2
33
38
1.69
26514--26563
21
2.5
19
87
6
64
48
6
14
32
1.67
26514--26570
19
2.8
20
86
5
71
42
7
14
36
1.72
27471--27530
30
2.0
31
86
3
86
53
10
8
28
1.63
38764--38813
14
3.9
13
73
21
52
78
2
20
0
0.86
38758--38813
19
3.1
18
82
17
71
78
1
19
0
0.84
38758--38813
11
4.7
11
74
21
51
78
1
19
0
0.84
43029--43078
14
3.9
13
73
21
52
78
2
20
0
0.86
43023--43078
19
3.1
18
82
17
71
78
1
19
0
0.84
43023--43078
11
4.7
11
74
21
51
78
1
19
0
0.84
49278--49333
13
4.7
11
74
21
51
0
19
1
78
0.84
49278--49333
18
3.1
18
82
17
71
0
19
1
78
0.84

Tables:   1

The End!