Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000874.1 Hibiscus syriacus cultivar Beakdansim tig00001689_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89610

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6880--6917
15
2.5
15
100
0
76
65
13
21
0
1.26
31380--31827
106
4.2
106
91
2
668
22
18
25
33
1.97
31738--31915
88
2.0
88
93
0
302
23
19
23
33
1.97
31824--32449
105
6.0
106
97
0
1109
22
18
26
33
1.96
50570--50633
30
2.1
31
91
2
103
37
3
4
54
1.37
52695--52736
21
2.0
21
95
0
75
33
16
14
35
1.89
57062--57099
2
19.0
2
100
0
76
50
50
0
0
1.00
60682--60721
19
2.1
19
85
0
53
32
12
7
47
1.69
67566--67591
13
2.0
13
100
0
52
46
7
15
30
1.74
81879--81916
17
2.2
17
95
0
67
34
13
28
23
1.92
88739--88849
57
1.9
57
87
0
159
41
9
14
35
1.77

Tables:   1

The End!