Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000875.1 Hibiscus syriacus cultivar Beakdansim tig00001694_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60045

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6708--6962
137
1.9
138
88
4
390
27
12
18
41
1.87
14223--14256
17
2.1
16
88
5
50
76
0
8
14
1.01
23867--23905
16
2.4
16
100
0
78
84
5
5
5
0.86
24284--24317
17
2.1
16
88
5
50
76
0
8
14
1.01
34959--35008
19
2.6
19
87
9
66
60
2
0
38
1.09
35429--35469
21
2.0
21
90
4
66
31
9
31
26
1.89
44314--44433
64
1.9
63
85
1
168
36
22
16
24
1.94
44314--44475
63
2.5
64
81
6
170
35
21
17
25
1.95
45680--45705
11
2.4
11
100
0
52
15
7
50
26
1.71
54046--54103
3
19.0
3
82
10
73
37
0
0
62
0.96
56359--56409
26
2.0
26
96
0
93
35
15
7
41
1.76

Tables:   1

The End!